Dear all,

I am experimenting with the TPP demo 2009 (http://
tools.proteomecenter.org/wiki/index.php?title=TPP_Demo2009) and
encountered two problems.

First, for step 6: Validation of Peptide-Spectrum assignments with
PeptideProphet,  I can never get past the Run XInteract step. My
command does not finish running even after over a day! (screen:
http://flic.kr/p/avNB4R)

Second, when I am trying step 7: Visualize LC-MS/MS data using Pep3D.
My browser tab shows "Connecting..." and a blank page that does not
load and eventually turns into a CGI error page (screen: 
http://flic.kr/p/avNAXk)

Any suggestion appreciated. Thank you.

Regards,
Chris

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