Thank you soooo much Jimmy. It works now!! On Oct 20, 2:18 pm, Jimmy Eng <[email protected]> wrote: > There's been a fix checked in to the Sashimi subversion repository > that addresses a known issue with XPressPeptideParser. Hopefully that > fix addresses the issue you're seeing. If not, let me know. > > Since you're using linux, build XPressPeptideParser from either the > trunk or branch4-5 code. > > On Thu, Oct 20, 2011 at 2:04 PM, Ping <[email protected]> wrote: > > Hi, > > > I installed tpp 4.5 on a Ubuntu 10.04 system. While I run > > XPressPeptideParser on either XTandem/OMSSA serach result pep.xml, I > > got this error: > > > *** glibc detected *** /usr/local/src/trans_proteomic_pipeline/build/ > > Ubuntu-x86_64/XPressPeptideParser: free(): invalid next size (fast): > > 0x0000000001b25640 *** > > ======= Backtrace: ========= > > /lib/libc.so.6(+0x775b6)[0x7f8c406735b6] > > /lib/libc.so.6(cfree+0x73)[0x7f8c40679e83] > > /usr/local/src/trans_proteomic_pipeline/build/Ubuntu-x86_64/ > > XPressPeptideParser[0x41af70] > > /usr/local/src/trans_proteomic_pipeline/build/Ubuntu-x86_64/ > > XPressPeptideParser[0x43f1bf] > > ... > > /lib/libc.so.6(__libc_start_main+0xfd)[0x7f8c4061ac4d] > > /usr/local/src/trans_proteomic_pipeline/build/Ubuntu-x86_64/ > > XPressPeptideParser[0x405ef9] > > > I run XPressPeptideParser on total 32 files, and 10 of them got the > > error. The others are fine. I debug the code, and it seems it is > > something with mzXML file. > > > Can anyone help? > > > Thanks, > > > Ping > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]. > > For more options, visit this group > > athttp://groups.google.com/group/spctools-discuss?hl=en.
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