Come to think of it I don't believe we do. On Wed, Feb 1, 2012 at 1:40 PM, Matthew Chambers <[email protected]>wrote:
> That's not an msconvert warning. Msconvert would handle his MRM data fine > as mzML, not mzXML. Does TPP work with mzML chromatograms yet? > > -Matt > > > > On 2/1/2012 3:35 PM, Joseph Slagel wrote: > >> Harry, >> >> I'm not sure I can be of any more help. I'd suggest you forward your >> question to the ProteoWizard's >> mailing list >> (proteowizard-support@lists.**sourceforge.net<[email protected]> >> <mailto:proteowizard-support@**lists.sourceforge.net<[email protected]> >> ><mailto:**[email protected] <[email protected]>>) and I'm >> sure >> >> you'll get a answer. >> >> -Joe >> >> >> On Tue, Jan 31, 2012 at 11:18 AM, Harry <[email protected] <mailto: >> [email protected]>> wrote: >> >> Hello Joe, >> >> Thank you for replying my question. >> >> The error message I got looks like this: >> >> ... >> Preprocessing function 97 >> !!Warning!!: ignoring function 97 with type MRM >> Preprocessing function 98 >> !!Warning!!: ignoring function 98 with type MRM >> Preprocessing function 99 >> !!Warning!!: ignoring function 99 with type MRM >> no scans found, exiting with error >> END OUTPUT >> RETURN CODE:65280 >> ###### End Command Execution ###### >> # All finished at Tue Jan 31 10:57:14 2012 >> # END COMMAND BLOCK >> >> I also tried msconvert. The program did generate a mzXML file from >> the raw data, but there is no actual data (MRM transitions and their >> signal intensities) in the mzXML file. Would it be more useful to you >> to see the problem if I send you the mzXML file? >> >> Thank you for your time. >> >> Harry >> >> On Jan 31, 10:40 am, Joseph Slagel >> <Joseph.Sla...@systemsbiology.**org<[email protected]> >> >> <mailto:Joseph.Sla...@**systemsbiology.org<[email protected]> >> >> >> >> wrote: >> > Harry, >> > >> > What error did you get? Did it look anything like: >> > >> > [Tue Jan 31 12:33:25 2012] EXECUTING: c:\Inetpub\tpp-bin\ReAdW -v -- >> > mzXML c:/Inetpub/wwwroot/ISB/data/**12032011_60min_PaG_XC_HP101_** >> 01.raw >> > OUTPUT: >> > The system cannot find message text for message number 0x2331 in the >> > message file for Application. >> > >> > If so, then please try using msconvert instead of ReAdW. We're no >> longer >> > supporting or bundling this program with TPP. >> > >> > -Joe >> > >> > >> > >> > >> > >> > >> > >> > On Mon, Jan 30, 2012 at 1:45 PM, Harry <[email protected] <mailto: >> [email protected]>> wrote: >> > > Hello, >> > >> > > I was trying to use the mzXML conversion tool in PPT to convert >> some >> > > MRM raw data acquired on a Waters Xevo through direct infusion. >> The >> > > program could not do it. Has anybody had similar problem? >> > >> > > Thank you for any ideas and suggestions. >> > >> > > Harry >> > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to > spctools-discuss@googlegroups.**com<[email protected]> > . > To unsubscribe from this group, send email to > spctools-discuss+unsubscribe@**googlegroups.com<spctools-discuss%[email protected]> > . > For more options, visit this group at http://groups.google.com/** > group/spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> > . > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
