Actually we do use the chromatograms for some RT stuff... On Wed, Feb 1, 2012 at 1:42 PM, Joseph Slagel <[email protected]> wrote: > Come to think of it I don't believe we do. > > > On Wed, Feb 1, 2012 at 1:40 PM, Matthew Chambers <[email protected]> > wrote: >> >> That's not an msconvert warning. Msconvert would handle his MRM data fine >> as mzML, not mzXML. Does TPP work with mzML chromatograms yet? >> >> -Matt >> >> >> >> On 2/1/2012 3:35 PM, Joseph Slagel wrote: >>> >>> Harry, >>> >>> I'm not sure I can be of any more help. I'd suggest you forward your >>> question to the ProteoWizard's >>> mailing list ([email protected] >>> >>> <mailto:[email protected]><mailto:[email protected]>) >>> and I'm sure >>> >>> you'll get a answer. >>> >>> -Joe >>> >>> >>> On Tue, Jan 31, 2012 at 11:18 AM, Harry <[email protected] >>> <mailto:[email protected]>> wrote: >>> >>> Hello Joe, >>> >>> Thank you for replying my question. >>> >>> The error message I got looks like this: >>> >>> ... >>> Preprocessing function 97 >>> !!Warning!!: ignoring function 97 with type MRM >>> Preprocessing function 98 >>> !!Warning!!: ignoring function 98 with type MRM >>> Preprocessing function 99 >>> !!Warning!!: ignoring function 99 with type MRM >>> no scans found, exiting with error >>> END OUTPUT >>> RETURN CODE:65280 >>> ###### End Command Execution ###### >>> # All finished at Tue Jan 31 10:57:14 2012 >>> # END COMMAND BLOCK >>> >>> I also tried msconvert. The program did generate a mzXML file from >>> the raw data, but there is no actual data (MRM transitions and their >>> signal intensities) in the mzXML file. Would it be more useful to you >>> to see the problem if I send you the mzXML file? >>> >>> Thank you for your time. >>> >>> Harry >>> >>> On Jan 31, 10:40 am, Joseph Slagel <[email protected] >>> <mailto:[email protected]>> >>> >>> wrote: >>> > Harry, >>> > >>> > What error did you get? Did it look anything like: >>> > >>> > [Tue Jan 31 12:33:25 2012] EXECUTING: c:\Inetpub\tpp-bin\ReAdW -v >>> -- >>> > mzXML >>> c:/Inetpub/wwwroot/ISB/data/12032011_60min_PaG_XC_HP101_01.raw >>> > OUTPUT: >>> > The system cannot find message text for message number 0x2331 in >>> the >>> > message file for Application. >>> > >>> > If so, then please try using msconvert instead of ReAdW. We're no >>> longer >>> > supporting or bundling this program with TPP. >>> > >>> > -Joe >>> > >>> > >>> > >>> > >>> > >>> > >>> > >>> > On Mon, Jan 30, 2012 at 1:45 PM, Harry <[email protected] >>> <mailto:[email protected]>> wrote: >>> > > Hello, >>> > >>> > > I was trying to use the mzXML conversion tool in PPT to convert >>> some >>> > > MRM raw data acquired on a Waters Xevo through direct infusion. >>> The >>> > > program could not do it. Has anybody had similar problem? >>> > >>> > > Thank you for any ideas and suggestions. >>> > >>> > > Harry >> >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en.
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