Thanks Jimmy. I found it, was testing to see if it works out fine. For others, this url Jimmy has given has other advanced parameters that we can refine. Just type the url till tandem api.
One Q though, does this api work with k-score tandem too? -----Original Message----- From: Jimmy Eng Sent: 07/03/2012, 9:38 PM To: [email protected] Subject: Re: [spctools-discuss] Semi tryptic searches in X!Tandem? here's the parameter you want: http://www.thegpm.org/tandem/api/pcsemi.html On Wed, Mar 7, 2012 at 2:49 AM, Amit Yadav <[email protected]> wrote: > Hi > > Does anyone know how to conduct semi-tryptic searches in x!tandem(native or > k-score)? > > I know about the refinement model but that limits the subsequent searches to > only those proteins identified in first pass. Is there a way around or am I > overloooking/missing something? > > Regards, > > Amit Kumar Yadav > Senior Research Fellow (SRF-CSIR) > IGIB, New Delhi (India) > > MassWiz Web server > MassWiz sourceforge project > MassWiki > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
