yes, you can do semi-tryptic searches with k-score On Thu, Mar 8, 2012 at 12:23 AM, <[email protected]> wrote: > Thanks Jimmy. I found it, was testing to see if it works out fine. For > others, this url Jimmy has given has other advanced parameters that we can > refine. Just type the url till tandem api. > > One Q though, does this api work with k-score tandem too? > -----Original Message----- > From: Jimmy Eng > Sent: 07/03/2012, 9:38 PM > To: [email protected] > Subject: Re: [spctools-discuss] Semi tryptic searches in X!Tandem? > > > here's the parameter you want: > > http://www.thegpm.org/tandem/api/pcsemi.html > > On Wed, Mar 7, 2012 at 2:49 AM, Amit Yadav <[email protected]> wrote: >> Hi >> >> Does anyone know how to conduct semi-tryptic searches in x!tandem(native or >> k-score)? >> >> I know about the refinement model but that limits the subsequent searches to >> only those proteins identified in first pass. Is there a way around or am I >> overloooking/missing something? >> >> Regards, >> >> Amit Kumar Yadav >> Senior Research Fellow (SRF-CSIR) >> IGIB, New Delhi (India) >> >> MassWiz Web server >> MassWiz sourceforge project >> MassWiki >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. >
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