Thanks a lot :) Regards, *Amit Kumar Yadav * Senior Research Fellow (SRF-CSIR) IGIB, New Delhi (India)
*MassWiz Web server* <http://masswiz.igib.res.in> * <http://masswiz.igib.res.in>**MassWiz sourceforge project*<https://sourceforge.net/projects/masswiz> * <https://sourceforge.net/projects/masswiz>**MassWiki*<https://sourceforge.net/apps/mediawiki/masswiz/index.php?title=MassWiki> On Thu, Mar 8, 2012 at 8:21 PM, Jimmy Eng <[email protected]> wrote: > yes, you can do semi-tryptic searches with k-score > > On Thu, Mar 8, 2012 at 12:23 AM, <[email protected]> wrote: > > Thanks Jimmy. I found it, was testing to see if it works out fine. For > others, this url Jimmy has given has other advanced parameters that we can > refine. Just type the url till tandem api. > > > > One Q though, does this api work with k-score tandem too? > > -----Original Message----- > > From: Jimmy Eng > > Sent: 07/03/2012, 9:38 PM > > To: [email protected] > > Subject: Re: [spctools-discuss] Semi tryptic searches in X!Tandem? > > > > > > here's the parameter you want: > > > > http://www.thegpm.org/tandem/api/pcsemi.html > > > > On Wed, Mar 7, 2012 at 2:49 AM, Amit Yadav <[email protected]> > wrote: > >> Hi > >> > >> Does anyone know how to conduct semi-tryptic searches in > x!tandem(native or > >> k-score)? > >> > >> I know about the refinement model but that limits the subsequent > searches to > >> only those proteins identified in first pass. Is there a way around or > am I > >> overloooking/missing something? > >> > >> Regards, > >> > >> Amit Kumar Yadav > >> Senior Research Fellow (SRF-CSIR) > >> IGIB, New Delhi (India) > >> > >> MassWiz Web server > >> MassWiz sourceforge project > >> MassWiki > >> > >> -- > >> You received this message because you are subscribed to the Google > Groups > >> "spctools-discuss" group. > >> To post to this group, send email to [email protected]. > >> To unsubscribe from this group, send email to > >> [email protected]. > >> For more options, visit this group at > >> http://groups.google.com/group/spctools-discuss?hl=en. > > > > -- > > You received this message because you are subscribed to the Google > Groups "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > [email protected]. > > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > > > > > -- > > You received this message because you are subscribed to the Google > Groups "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > [email protected]. > > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
