Hi Bjorn, Did you ever get a solution to this problem?
I keep encountering the same issue. Thanks, Claire On Friday, August 27, 2010 1:23:54 AM UTC+9:30, Bjorn wrote: > > Hi, > > I can do a tandem database search that results in a .tandem file. > I successfully convert it into a .tandem.pep.xml where I clearly see > that I have 2+ and 3+ spectra with hyperscores of +700. > When I run peptideprophet on that file, the result is a .pep.xml file > with only the 1+ left (no 2+ or 3+) > Where have all the good spectra I had before Xinteract gone?? > I would expect those to be still there and have high probability > scores... > > Any suggestion is welcome. > > I'm using TPP 4.4.0 on Mac OS X 10.6.4. > > Bjorn -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To view this discussion on the web visit https://groups.google.com/d/msg/spctools-discuss/-/WFHXaitAt_4J. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
