Are you running this on Windows? Is there an active tandem.exe job in your task manager? Is there a file visible in windows containing the results for the 2-day search?
-David On Sun, Aug 11, 2013 at 11:02 AM, ruchir mishra <[email protected]> wrote: > Hi > The program is still running but it is more than 2 days. The status is > showing that the program is running. For generating target-decoy database I > used TPPs decoy database and for parameters I used tandem-params which is > there in the TPP without any modification.I am attaching tandem-params for > your kind perusal. > > Thanks > Ruchir > > > On Sunday, August 11, 2013 1:11:11 PM UTC-4, David Shteynberg wrote: > >> The most likely explanation without any other information is a bad >> character in the Decoy database or something with the search parameters. >> Posting both would help us get to the root of the issue. When you say it >> took two days and failed was the program generating any output or somehow >> making progress can you verify that it was actually running? Posting any >> output would also be helpful. >> >> David >> On Aug 11, 2013 12:07 AM, "ruchir mishra" <[email protected]> wrote: >> >>> Hi >>> >>> Could anyone please let me know why I have not got any results after 2 >>> days when using decoy database but without decoy database I got the result >>> within 2 hrs. using Tandem in trans proteomic pipeline. >>> >>> Thanks >>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to spctools-discu...@**googlegroups.com. >>> To post to this group, send email to spctools...@googlegroups.**com. >>> >>> Visit this group at >>> http://groups.google.com/**group/spctools-discuss<http://groups.google.com/group/spctools-discuss> >>> . >>> For more options, visit >>> https://groups.google.com/**groups/opt_out<https://groups.google.com/groups/opt_out> >>> . >>> >>> >>> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/groups/opt_out. > > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/groups/opt_out.
