If there is no tandem.exe in Task Manager it means tandem is actually not running. Yet somehow Petunia still think it is running. You will need to resubmit the search.
-David On Sun, Aug 11, 2013 at 2:17 PM, ruchir mishra <[email protected]> wrote: > Hi > > Yes I am running it on windows 7. There is no file visible in windows. > There is not an active tandem.exe in my task manager. In TPP it is showing > that my (command) program is running. This is for the first time I am > facing this problem. > > Thanks > Ruchir > > On Sunday, August 11, 2013 2:44:17 PM UTC-4, David Shteynberg wrote: > >> Are you running this on Windows? Is there an active tandem.exe job in >> your task manager? Is there a file visible in windows containing the >> results for the 2-day search? >> >> -David >> >> >> On Sun, Aug 11, 2013 at 11:02 AM, ruchir mishra <[email protected]>wrote: >> >>> Hi >>> The program is still running but it is more than 2 days. The status is >>> showing that the program is running. For generating target-decoy database I >>> used TPPs decoy database and for parameters I used tandem-params which is >>> there in the TPP without any modification.I am attaching tandem-params for >>> your kind perusal. >>> >>> Thanks >>> Ruchir >>> >>> >>> On Sunday, August 11, 2013 1:11:11 PM UTC-4, David Shteynberg wrote: >>> >>>> The most likely explanation without any other information is a bad >>>> character in the Decoy database or something with the search parameters. >>>> Posting both would help us get to the root of the issue. When you say it >>>> took two days and failed was the program generating any output or somehow >>>> making progress can you verify that it was actually running? Posting any >>>> output would also be helpful. >>>> >>>> David >>>> On Aug 11, 2013 12:07 AM, "ruchir mishra" <[email protected]> wrote: >>>> >>>>> Hi >>>>> >>>>> Could anyone please let me know why I have not got any results after 2 >>>>> days when using decoy database but without decoy database I got the result >>>>> within 2 hrs. using Tandem in trans proteomic pipeline. >>>>> >>>>> Thanks >>>>> >>>>> -- >>>>> You received this message because you are subscribed to the Google >>>>> Groups "spctools-discuss" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>> an email to spctools-discu...@**googlegroups**.com. >>>>> To post to this group, send email to spctools...@googlegroups.**com. >>>>> >>>>> Visit this group at http://groups.google.com/**group** >>>>> /spctools-discuss <http://groups.google.com/group/spctools-discuss>. >>>>> For more options, visit >>>>> https://groups.google.com/**grou**ps/opt_out<https://groups.google.com/groups/opt_out> >>>>> . >>>>> >>>>> >>>>> >>>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to spctools-discu...@**googlegroups.com. >>> To post to this group, send email to spctools...@googlegroups.**com. >>> Visit this group at >>> http://groups.google.com/**group/spctools-discuss<http://groups.google.com/group/spctools-discuss> >>> . >>> For more options, visit >>> https://groups.google.com/**groups/opt_out<https://groups.google.com/groups/opt_out> >>> . >>> >>> >>> >> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/groups/opt_out. > > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/groups/opt_out.
