Hi Yes I am running it on windows 7. There is no file visible in windows. There is not an active tandem.exe in my task manager. In TPP it is showing that my (command) program is running. This is for the first time I am facing this problem.
Thanks Ruchir On Sunday, August 11, 2013 2:44:17 PM UTC-4, David Shteynberg wrote: > > Are you running this on Windows? Is there an active tandem.exe job in > your task manager? Is there a file visible in windows containing the > results for the 2-day search? > > -David > > > On Sun, Aug 11, 2013 at 11:02 AM, ruchir mishra > <[email protected]<javascript:> > > wrote: > >> Hi >> The program is still running but it is more than 2 days. The status is >> showing that the program is running. For generating target-decoy database I >> used TPPs decoy database and for parameters I used tandem-params which is >> there in the TPP without any modification.I am attaching tandem-params for >> your kind perusal. >> >> Thanks >> Ruchir >> >> >> On Sunday, August 11, 2013 1:11:11 PM UTC-4, David Shteynberg wrote: >> >>> The most likely explanation without any other information is a bad >>> character in the Decoy database or something with the search parameters. >>> Posting both would help us get to the root of the issue. When you say it >>> took two days and failed was the program generating any output or somehow >>> making progress can you verify that it was actually running? Posting any >>> output would also be helpful. >>> >>> David >>> On Aug 11, 2013 12:07 AM, "ruchir mishra" <[email protected]> wrote: >>> >>>> Hi >>>> >>>> Could anyone please let me know why I have not got any results after 2 >>>> days when using decoy database but without decoy database I got the result >>>> within 2 hrs. using Tandem in trans proteomic pipeline. >>>> >>>> Thanks >>>> >>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "spctools-discuss" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to spctools-discu...@**googlegroups.com. >>>> To post to this group, send email to spctools...@googlegroups.**com. >>>> >>>> Visit this group at >>>> http://groups.google.com/**group/spctools-discuss<http://groups.google.com/group/spctools-discuss> >>>> . >>>> For more options, visit >>>> https://groups.google.com/**groups/opt_out<https://groups.google.com/groups/opt_out> >>>> . >>>> >>>> >>>> >>> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected] <javascript:>. >> To post to this group, send email to >> [email protected]<javascript:> >> . >> Visit this group at http://groups.google.com/group/spctools-discuss. >> For more options, visit https://groups.google.com/groups/opt_out. >> >> >> > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/groups/opt_out.
