If you compile on Linux, your executable will almost surely be 64-bit as all modern distros are 64-bit.
The issue with Windows is that our default compiler is still 32-bit and so we generate 32-bits executables. But we’re working on creating a 64-bit Windows build, but it is a little tricky. However, we do have a valid 64-bit executable for SpectraST that I pointed you to. For the very reason that you encountered. Starting with TPP 5.0, everything will be 64-bit. Regards, Eric *From:* [email protected] [mailto: [email protected]] *On Behalf Of *delphine wood *Sent:* Wednesday, November 26, 2014 3:25 AM *To:* [email protected] *Subject:* Re: [spctools-discuss] spectraST error Hello, I tried to run the spectrast search on the big human_nist_protein library on a 64 bit windows, but with the actual version of TPP, and as expected the same error occured. Thus I installed TPP on linux, and it seems to be working; at least the same error doesn't occur. I didn't tried to use the 64-bit executable for SpectraST, unless it is included in the sources of the last version of tpp I used for the linux installation... Delphine 2014-11-20 18:20 GMT+01:00 Eric Deutsch <[email protected]>: In addition to running on a 64-bit operating system, you will need a 64-bit SpectraST executable. I think there is a test 64-bit executable for SpectraST at: http://sourceforge.net/projects/sashimi/files/Trans-Proteomic%20Pipeline%20%28TPP%29/TPP%20v0.0%20%28Development%29/ you can download the “spectrast.exe” file there and replace the installed spectrast.exe with the one that you download. That may fix the problem. Eric *From:* [email protected] [mailto: [email protected]] *On Behalf Of *David Shteynberg *Sent:* Thursday, November 20, 2014 8:20 AM *To:* spctools-discuss *Subject:* Re: [spctools-discuss] spectraST error You will also require a 64bit TPP build for windows that we are still working on. David On Nov 20, 2014 8:12 AM, "delphine wood" <[email protected]> wrote: I have read the issue note( release notes ). <http://tools.proteomecenter.org/wiki/index.php?title=TPP:4.7.1_Release_Notes> Do you think that if I install TPP on a windows 7 , 64 bit system the problem could be solved? I will try and let you know if this solved the problem. Delphine 2014-11-20 11:49 GMT+01:00 Rene B <[email protected]>: I tried this as well a few weeks ago with several human libraries, and ran in the same issue. I assumed it was a windows memory issue, the NIST human libraries are over 2GB. This is a known issue listed in the TPP4.7.1 release notes <http://tools.proteomecenter.org/wiki/index.php?title=TPP:4.7.1_Release_Notes>. I have not tried it on linux though. Rene On Thursday, 20 November 2014 11:26:49 UTC+1, Delphine wrote: I downloaded it again but the same error remains... I tried with the HumanPlasma_2012-08_all.splib library and it works, but it's not the library I'm interested in.... Could it be that the NIST_human_IT_2010_01_14_7AA.splib is corrupted from the source? Delphine 2014-11-18 19:15 GMT+01:00 David Shteynberg <[email protected] >: Looks like this file "c:/Inetpub/wwwroot/ISB/data/dbase/speclibs/NIST_human_IT_2010_01_14_7AA.splib" is corrupted. Can you try to download the file again? On Tue, Nov 18, 2014 at 9:52 AM, Delphine <[email protected]> wrote: > Hello, > > I'm trying to use spectraST. I downloaded the > NIST_human_IT_2010_01_14_7AA.splib library in a "dbase/speclibs/" folder, > with the tpp tool and also directly from the website. Now whatever I do with > this library (interrogation or just making a consensus library) I get this > error: > > > SpectraST started at Tue Nov 18 18:06:47 2014. > Creating CONSENSUS library from > "c:/Inetpub/wwwroot/ISB/data/dbase/speclibs/NIST_human_IT_2010_01_14_7AA.splib" > Importing > ions...500...1000...1500...2000...2500...3000...3500...4000...4500...5000...5500...6000...6500...7000...7500...800 > ==== FATAL ERROR. Exiting immediately. ==== > Error trace : > GENERAL: Corrupt .splib file from which to import entry. > =========================================== > > Could someone help me solving this problem? > > Thanks > > Delphine > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to a topic in the Google Groups "spctools-discuss" group. To unsubscribe from this topic, visit https://groups.google.com/d/topic/spctools-discuss/R_oTf7Bdqj8/unsubscribe. To unsubscribe from this group and all its topics, send an email to [email protected]. To post to this group, send email to [email protected]. 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