The new viewer has been updated to display and export protein length. It will be included in the next release of TPP, but I'd be glad to forward you an advance copy so that you can get to your data.
And I have not been able to see what's wrong with the legacy viewer; I just tested it in 3 different machines and seems to be working. Can you share your protXML file so I can try to debug? Furthermore, if there is a problem with the code, an error might have been logged to the web server error log; you can explore this by opening the file httpd-error.log, typically found under C:\TPP\log\ . Or if you don't mind sharing this file, I can have a look. Cheers, --Luis On Tue, Nov 29, 2016 at 5:20 AM, Kevin Hart <[email protected]> wrote: > Do you know how to get it to export protein length with the .tsv file from > ProtXML? > > > On Wednesday, November 23, 2016 at 3:52:08 PM UTC-5, Kevin Hart wrote: >> >> I can see both tables and graphical models. My files were not where TPP >> thought they were and thus confusion arose when I clicked on models in >> ProtXML. ProtXML just didnt know where to look. >> >> Legacy Viewer was nice because I was able to select different things to >> be displayed like protein length and all of those other toggles. I cant >> find a way in ProtXML to have it export those other things for me so I can >> generate SAF and NSAF values. >> >> On Wednesday, November 23, 2016 at 1:26:24 PM UTC-5, Luis wrote: >>> >>> That's great. Can you only see the tables? Or also the graphical >>> models? >>> >>> The legacy viewer is being phased out in favor of the new one, and is >>> slated for removal from distribution. Is there a specific function that >>> you need from it that the new one does not have? >>> If you really need it soon, you could install a previous version of TPP >>> on a different computer and open your file there. >>> >>> --Luis >>> >>> >>> On Wed, Nov 23, 2016 at 9:10 AM, Kevin Hart <[email protected]> >>> wrote: >>> >>>> I am able to gain access now to the error sensitivity tables but still >>>> need access to legacy viewer. >>>> >>>> >>>> On Monday, November 21, 2016 at 11:42:45 AM UTC-5, Kevin Hart wrote: >>>>> >>>>> I downloaded and am using the new version of TPP(5.0) on Windows 7 >>>>> however im running into a small issue. I can not access the >>>>> error/sensitivity tables through both ProtXML Viewer (Forbidden You don't >>>>> have permission to access >>>>> /tpp/data/SEL42/SEL42.Tandem.Comet.interact.prot-MODELS.html >>>>> on this server.) and legacy viewer is not loading at all. Unfortunately I >>>>> need these things to run all of my analysis. If anyone would have a work >>>>> around or fix for this I would appreciate it. >>>>> >>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "spctools-discuss" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to [email protected]. >>>> To post to this group, send email to [email protected]. >>>> Visit this group at https://groups.google.com/group/spctools-discuss. >>>> For more options, visit https://groups.google.com/d/optout. >>>> >>> >>> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
