Can you do a search and replace to replace all occurrences of K[GlyGly] with K[242] in your library?
On Fri, Nov 10, 2017 at 1:48 AM, Marine <[email protected]> wrote: > Hi everyone, > > I am running spectrast on ubiquitinated data and I see that > ubiquitinations on spectrast results file are tagged like K[GlyGly], but > this leads to an error during the export of the library with > spectrast2tsv.py : > This modification has not been recognized : K > > > > Found in the following sequence : AAAAAAALQAK[GlyGly]SDEK > > > > The code used to interpret it was : TPP > I also see that in iProphet result file ubiquitinations are tagged with > K[242], so the transformation into K[GlyGly] is realized during spectrast. > I am wondering whether there is a way of keeping K[242] tag for > ubiquitinations ? > > Thanks, > Marine. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
