I am not sure what went wrong during the creation of the pepXML file but all spectra in the file have missing scan_numbers and charges as in:
<spectrum_query spectrum="20131226_HeLa_bRP01_120min.00000.00000.0" index="3" start_scan="" end_scan=""> How was the pepXML file generated? Did you run the search on the mzML files? Do you have the tandem output available? Thanks, -David On Wed, Jan 17, 2018 at 8:51 AM, Thibault Robin <[email protected]> wrote: > Here is a link: > > https://www.dropbox.com/s/eexii278kmvyjxp/20131226_HeLa_ > bRP01_120min.mzML?dl=0 > > Thank you, > > Thibault > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
