Thank you:
[root@xena src]# more /opt/votca/src/tools/CMakeFiles/CMakeError.log
Determining if the function pthread_create exists in the pthreads
failed with the following output:
Change Dir: /opt/votca/src/tools/CMakeFiles/CMakeTmp
Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
/usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make
CMakeFiles/cmTryCompileExec.dir/build
gmake[1]: Entering directory `/opt/votca/src/tools/CMakeFiles/
CMakeTmp'
/usr/local/bin/cmake -E cmake_progress_report /opt/votca/src/tools/
CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec.dir/
CheckFunctionExists.c.o
/usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/
cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/
cmake-2.8/Modul
es/CheckFunctionExists.c
Linking C executable cmTryCompileExec
/usr/local/bin/cmake -E cmake_link_script CMakeFiles/
cmTryCompileExec.dir/link.txt --verbose=1
/usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/
cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -
rdynamic -lpthr
eads
/usr/bin/ld: cannot find -lpthreads
collect2: ld returned 1 exit status
gmake[1]: *** [cmTryCompileExec] Error 1
gmake[1]: Leaving directory `/opt/votca/src/tools/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec/fast] Error 2
Determining if the function fftw_plan_r2r_1d exists in the /usr/local/
lib/libfftw3f.so failed with the following output:
Change Dir: /opt/votca/src/tools/CMakeFiles/CMakeTmp
Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
/usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make
CMakeFiles/cmTryCompileExec.dir/build
gmake[1]: Entering directory `/opt/votca/src/tools/CMakeFiles/
CMakeTmp'
/usr/local/bin/cmake -E cmake_progress_report /opt/votca/src/tools/
CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec.dir/
CheckFunctionExists.c.o
/usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o
CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/
local/share/cmake-2.8/Mod
ules/CheckFunctionExists.c
Linking C executable cmTryCompileExec
/usr/local/bin/cmake -E cmake_link_script CMakeFiles/
cmTryCompileExec.dir/link.txt --verbose=1
/usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d
CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o
cmTryCompileExec -rdynamic /usr
/local/lib/libfftw3f.so -Wl,-rpath,/usr/local/lib
CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o: In function
`main':
CheckFunctionExists.c:(.text+0x15): undefined reference to
`fftw_plan_r2r_1d'
collect2: ld returned 1 exit status
gmake[1]: *** [cmTryCompileExec] Error 1
gmake[1]: Leaving directory `/opt/votca/src/tools/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec/fast] Error 2
On Aug 19, 1:47 pm, Christoph Junghans <jungh...@votca.org> wrote:
> Hmm, I have not tested fftw 3.3, it must be super new.
> Can you post the part of your CMakeError.log, which contains the
> actual error message?
>
> Cheers,
>
> Christoph
>
> 2011/8/19 Valentina <valentina_erast...@yahoo.co.uk>:
>
>
>
> > Ok, the first part works:) but now I am stuck a little further
>
> > I have fftw3, shared, version 3.3, just freshly installed
> > [root@xena fftw-3.3]# find /usr -name '*fftw3*.so' -print
> > /usr/local/lib/libfftw3.so
> > /usr/local/lib/libfftw3f.so
> > /usr/local/lib/libfftw3f_threads.so
>
> > I try to compile against it (even giving a path)
> > [root@xena src]# ./build.sh --dev -DEXTERNAL_BOOST=OFF -
> > DFFTW3_LIBRARY=/usr/local/lib/libfftw3.so --prefix ${prefix} tools
> > csg
>
> > But it seems not to like my fftw and complains:
>
> > cmake -DCMAKE_INSTALL_PREFIX=/opt/votca -DEXTERNAL_BOOST=OFF -
> > DFFTW3_LIBRARY=/usr/local/lib/libfftw3.so -
> > DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON .
> > -- Could NOT find TXT2TAGS (missing: TXT2TAGS_EXECUTABLE)
> > txt2tags not found, help cmake to find it by setting
> > TXT2TAGS_EXECUTABLE
> > -- checking for module 'fftw3'
> > -- package 'fftw3' not found
> > -- Found FFTW3: /usr/local/lib/libfftw3.so
> > CMake Error at CMakeModules/FindFFTW3.cmake:43 (message):
> > Could not find fftw_plan_r2r_1d in /usr/local/lib/libfftw3.so, take
> > a look
> > at the error message in /opt/votca/src/tools/CMakeFiles/
> > CMakeError.log to
> > find out what was going wrong. If you don't have pkg-config
> > installed you
> > will most likely have to set FFTW3_LIBRARY by hand (i.e.
> > -DFFTW3_LIBRARY='/path/to/libfftw3.so') !
> > Call Stack (most recent call first):
> > src/libtools/CMakeLists.txt:11 (find_package)
>
> > -- Configuring incomplete, errors occurred!
>
> > Is there some trick?
>
> > Thank you very much for your continuous help.
> > V
>
> > On Aug 18, 9:39 pm, Valentina <valentina_erast...@yahoo.co.uk> wrote:
> >> Great, thanks!
>
> >> I will try it tomorrow:)
>
> >> V
>
> >> On Aug 18, 8:10 pm, Christoph Junghans <jungh...@votca.org> wrote:
>
> >> > Hi Valentina,
>
> >> > it seems you are a bug hunter ;-)
> >> > I just found the problem in build.sh, just run ./build.sh --selfupdate
>
> >> > './build.sh --dev XXX' builds the development version
> >> > while './build.sh XXX' builds the stable version.
>
> >> > Cheers,
>
> >> > Christoph
>
> >> > 2011/8/18 Valentina <valentina_erast...@yahoo.co.uk>:
>
> >> > > Hello again,
>
> >> > > I am currently trying to install VOTCA onto Centos 5.4,
>
> >> > > I have mercurial installed & cmake.
>
> >> > > When running I get the following:
>
> >> > > ./build.sh --prefix ${prefix} tools csg
> >> > > This is VOTCA build.sh, version 1.7.1
> >> > > prefix is '/opt/votca'
> >> > > Using 5 jobs for make
> >> > > Working on tools
> >> > > Doing checkout for tools fromhttps://tools.votca.googlecode.com/hg/
> >> > > (CTRL-C to stop) 5 4 3 2 1
> >> > > warning: certificate for tools.votca.googlecode.com can't be verified
> >> > > (Python too old)
> >> > > requesting all changes
> >> > > adding changesets
> >> > > adding manifests
> >> > > adding file changes
> >> > > added 477 changesets with 2608 changes to 1678 files
> >> > > updating to branch default
> >> > > 1460 files updated, 0 files merged, 0 files removed, 0 files
> >> > > unresolved
> >> > > abort: no repository found in '/opt/votca/src' (.hg not found)!
> >> > > No stable branch found, skipping switching!
> >> > > We build the stable version of tools, but we are on branch default and
> >> > > not 'stable'. Please checkout the stable branch with 'hg update
> >> > > stable' or add --dev option (disable this check with the --no-
> >> > > branchcheck option)
>
> >> > > I also tried putting --no-branchcheck or --dev but it didn't seem to
> >> > > help.
>
> >> > > Thank you very much for your help,
> >> > > Valentina
>
> >> > > --
> >> > > You received this message because you are subscribed to the Google
> >> > > Groups "votca" group.
> >> > > To post to this group, send email to votca@googlegroups.com.
> >> > > To unsubscribe from this group, send email to
> >> > > votca+unsubscr...@googlegroups.com.
> >> > > For more options, visit this group
> >> > > athttp://groups.google.com/group/votca?hl=en.
>
> >> > --
> >> > Dr. Christoph Junghans
> >> > Votca Core Developer
>
> >> > Web:http://www.votca.org
>
> > --
> > You received this message because you are subscribed to the Google Groups
> > "votca" group.
> > To post to this group, send email to votca@googlegroups.com.
> > To unsubscribe from this group, send email to
> > votca+unsubscr...@googlegroups.com.
> > For more options, visit this group
> > athttp://groups.google.com/group/votca?hl=en.
>
> --
> Dr. Christoph Junghans
> Votca Core Developer
>
> Web:http://www.votca.org
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