Yep, I am building with: ./build.sh --dev -DEXTERNAL_BOOST=OFF -DFFTW3_LIBRARY=/usr/local/lib/ libfftw3.so --prefix ${prefix} tools csg
But seems there is no libvotca_boost or libvotca_tools.so [root@xena src]# find * -name *libvotca_boost.so* [root@xena src]# find * -name *libvotca_tools.so* [root@xena src]# Thank you, V On Aug 19, 4:02 pm, Christoph Junghans <jungh...@votca.org> wrote: > If you build/install votca tools with -DEXTERNAL_BOOST=OFF then there > should be a libvotca_boost.so in the place where libvotca_tools.so is. > > Christoph > > 2011/8/19 Valentina <valentina_erast...@yahoo.co.uk>: > > > Thank you very much, it worked! till next stage (seems I am gifted for > > finding/creating problems) > > > cmake -DCMAKE_INSTALL_PREFIX=tools -DEXTERNAL_BOOST=OFF - > > DFFTW3_LIBRARY=/usr/local/lib/libfftw3.so - > > DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON . > > -- Could NOT find TXT2TAGS (missing: TXT2TAGS_EXECUTABLE) > > txt2tags not found, help cmake to find it by setting > > TXT2TAGS_EXECUTABLE > > -- checking for module 'libvotca_boost' > > -- package 'libvotca_boost' not found > > CMake Error at /usr/local/share/cmake-2.8/Modules/ > > FindPackageHandleStandardArgs.cmake:91 (MESSAGE): > > Could NOT find VOTCA_BOOST (missing: VOTCA_BOOST_LIBRARY > > VOTCA_BOOST_INCLUDE_DIR) > > Call Stack (most recent call first): > > /usr/local/share/cmake-2.8/Modules/ > > FindPackageHandleStandardArgs.cmake:252 (_FPHSA_FAILURE_MESSAGE) > > CMakeModules/FindVOTCA_BOOST.cmake:35 > > (find_package_handle_standard_args) > > CMakeLists.txt:62 (find_package) > > > -- Configuring incomplete, errors occurred! > > > I am wondering if it is related to my votca_tools being in: > > > [root@xena src]# find / -name *votca_boost* > > /opt/votca/src/tools/src/libboost/libvotca_boost.pc > > /opt/votca/src/tools/src/libboost/libvotca_boost.pc.in > > > But then I am not too sure if I can set VOTCA_BOOST_LIBRARY and > > VOTCA_BOOST_INCLUDE_DIR to the above paths? What are the libraries > > then? > > > Many thanks! > > V > > > On Aug 19, 2:17 pm, Christoph Junghans <jungh...@votca.org> wrote: > >> I just tested Votca with fftw 3.3 and it works here. > > >> It looks strange to me that in your CMakeError.log it says: > >> "Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ > >> lib/libfftw3f.so failed with the following output:" > > >> 'libfftw3f.so' is the single precision version of fftw, which we do > >> not support, Konstantin is working on that: > >> <http://code.google.com/p/votca/issues/detail?id=105> > > >> Possible solutions: > >> -build fftw again (make sure you build the double precision version, > >> which is actually the default) > >> $make clean; ./configure --prefix=XXX --enable-shared --disable-float; > >> make; make install > >> -disable fftw support with -DWITH_FFTW=OFF, if you do so csg_boltzmann > >> will lose the ability to calculate autocorrelations. > >> -have a look at CMakeCache.txt to tweak other options related to fftw. > > >> Cheers, > > >> Christoph > > >> 2011/8/19 Valentina <valentina_erast...@yahoo.co.uk>: > > >> > Thank you: > > >> > [root@xena src]# more /opt/votca/src/tools/CMakeFiles/CMakeError.log > >> > Determining if the function pthread_create exists in the pthreads > >> > failed with the following output: > >> > Change Dir: /opt/votca/src/tools/CMakeFiles/CMakeTmp > > >> > Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast" > >> > /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make > >> > CMakeFiles/cmTryCompileExec.dir/build > >> > gmake[1]: Entering directory `/opt/votca/src/tools/CMakeFiles/ > >> > CMakeTmp' > >> > /usr/local/bin/cmake -E cmake_progress_report /opt/votca/src/tools/ > >> > CMakeFiles/CMakeTmp/CMakeFiles 1 > >> > Building C object CMakeFiles/cmTryCompileExec.dir/ > >> > CheckFunctionExists.c.o > >> > /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ > >> > cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ > >> > cmake-2.8/Modul > >> > es/CheckFunctionExists.c > >> > Linking C executable cmTryCompileExec > >> > /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ > >> > cmTryCompileExec.dir/link.txt --verbose=1 > >> > /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ > >> > cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - > >> > rdynamic -lpthr > >> > eads > >> > /usr/bin/ld: cannot find -lpthreads > >> > collect2: ld returned 1 exit status > >> > gmake[1]: *** [cmTryCompileExec] Error 1 > >> > gmake[1]: Leaving directory `/opt/votca/src/tools/CMakeFiles/CMakeTmp' > >> > gmake: *** [cmTryCompileExec/fast] Error 2 > > >> > Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ > >> > lib/libfftw3f.so failed with the following output: > >> > Change Dir: /opt/votca/src/tools/CMakeFiles/CMakeTmp > > >> > Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast" > >> > /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make > >> > CMakeFiles/cmTryCompileExec.dir/build > >> > gmake[1]: Entering directory `/opt/votca/src/tools/CMakeFiles/ > >> > CMakeTmp' > >> > /usr/local/bin/cmake -E cmake_progress_report /opt/votca/src/tools/ > >> > CMakeFiles/CMakeTmp/CMakeFiles 1 > >> > Building C object CMakeFiles/cmTryCompileExec.dir/ > >> > CheckFunctionExists.c.o > >> > /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o > >> > CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ > >> > local/share/cmake-2.8/Mod > >> > ules/CheckFunctionExists.c > >> > Linking C executable cmTryCompileExec > >> > /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ > >> > cmTryCompileExec.dir/link.txt --verbose=1 > >> > /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d > >> > CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o > >> > cmTryCompileExec -rdynamic /usr > >> > /local/lib/libfftw3f.so -Wl,-rpath,/usr/local/lib > >> > CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o: In function > >> > `main': > >> > CheckFunctionExists.c:(.text+0x15): undefined reference to > >> > `fftw_plan_r2r_1d' > >> > collect2: ld returned 1 exit status > >> > gmake[1]: *** [cmTryCompileExec] Error 1 > >> > gmake[1]: Leaving directory `/opt/votca/src/tools/CMakeFiles/CMakeTmp' > >> > gmake: *** [cmTryCompileExec/fast] Error 2 > > >> > On Aug 19, 1:47 pm, Christoph Junghans <jungh...@votca.org> wrote: > >> >> Hmm, I have not tested fftw 3.3, it must be super new. > >> >> Can you post the part of your CMakeError.log, which contains the > >> >> actual error message? > > >> >> Cheers, > > >> >> Christoph > > >> >> 2011/8/19 Valentina <valentina_erast...@yahoo.co.uk>: > > >> >> > Ok, the first part works:) but now I am stuck a little further > > >> >> > I have fftw3, shared, version 3.3, just freshly installed > >> >> > [root@xena fftw-3.3]# find /usr -name '*fftw3*.so' -print > >> >> > /usr/local/lib/libfftw3.so > >> >> > /usr/local/lib/libfftw3f.so > >> >> > /usr/local/lib/libfftw3f_threads.so > > >> >> > I try to compile against it (even giving a path) > >> >> > [root@xena src]# ./build.sh --dev -DEXTERNAL_BOOST=OFF - > >> >> > DFFTW3_LIBRARY=/usr/local/lib/libfftw3.so --prefix ${prefix} tools > >> >> > csg > > >> >> > But it seems not to like my fftw and complains: > > >> >> > cmake -DCMAKE_INSTALL_PREFIX=/opt/votca -DEXTERNAL_BOOST=OFF - > >> >> > DFFTW3_LIBRARY=/usr/local/lib/libfftw3.so - > >> >> > DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON . > >> >> > -- Could NOT find TXT2TAGS (missing: TXT2TAGS_EXECUTABLE) > >> >> > txt2tags not found, help cmake to find it by setting > >> >> > TXT2TAGS_EXECUTABLE > >> >> > -- checking for module 'fftw3' > >> >> > -- package 'fftw3' not found > >> >> > -- Found FFTW3: /usr/local/lib/libfftw3.so > >> >> > CMake Error at CMakeModules/FindFFTW3.cmake:43 (message): > >> >> > Could not find fftw_plan_r2r_1d in /usr/local/lib/libfftw3.so, take > >> >> > a look > >> >> > at the error message in /opt/votca/src/tools/CMakeFiles/ > >> >> > CMakeError.log to > >> >> > find out what was going wrong. If you don't have pkg-config > >> >> > installed you > >> >> > will most likely have to set FFTW3_LIBRARY by hand (i.e. > >> >> > -DFFTW3_LIBRARY='/path/to/libfftw3.so') ! > >> >> > Call Stack (most recent call first): > >> >> > src/libtools/CMakeLists.txt:11 (find_package) > > >> >> > -- Configuring incomplete, errors occurred! > > >> >> > Is there some trick? > > >> >> > Thank you very much for your continuous help. > >> >> > V > > >> >> > On Aug 18, 9:39 pm, Valentina <valentina_erast...@yahoo.co.uk> wrote: > >> >> >> Great, thanks! > > >> >> >> I will try it tomorrow:) > > >> >> >> V > > >> >> >> On Aug 18, 8:10 pm, Christoph Junghans <jungh...@votca.org> wrote: > > >> >> >> > Hi Valentina, > > >> >> >> > it seems you are a bug hunter ;-) > >> >> >> > I just found the problem in build.sh, just run ./build.sh > >> >> >> > --selfupdate > > >> >> >> > './build.sh --dev XXX' builds the development version > >> >> >> > while './build.sh XXX' builds the stable version. > > >> >> >> > Cheers, > > >> >> >> > Christoph > > >> >> >> > 2011/8/18 Valentina <valentina_erast...@yahoo.co.uk>: > > >> >> >> > > Hello again, > > >> >> >> > > I am currently trying to install VOTCA onto Centos 5.4, > > >> >> >> > > I have mercurial installed & cmake. > > >> >> >> > > When running I get the following: > > >> >> >> > > ./build.sh --prefix ${prefix} tools csg > >> >> >> > > This is VOTCA build.sh, version 1.7.1 > >> >> >> > > prefix is '/opt/votca' > >> >> >> > > Using 5 jobs for make > >> >> >> > > Working on tools > >> >> >> > > Doing checkout for tools > >> >> >> > > fromhttps://tools.votca.googlecode.com/hg/ > >> >> >> > > (CTRL-C to stop) 5 4 3 2 1 > >> >> >> > > warning: certificate for tools.votca.googlecode.com can't be > >> >> >> > > verified > >> >> >> > > (Python too old) > >> >> >> > > requesting all changes > >> >> >> > > adding changesets > >> >> >> > > adding manifests > >> >> >> > > adding file changes > >> >> >> > > added 477 changesets with 2608 changes to 1678 files > >> >> >> > > updating to branch default > >> >> >> > > 1460 files updated, 0 files merged, 0 files removed, 0 files > >> >> >> > > unresolved > >> >> >> > > abort: no repository found in '/opt/votca/src' (.hg not found)! > >> >> >> > > No stable branch found, skipping switching! > >> >> >> > > We build the stable version of tools, but we are on branch > >> >> >> > > default and > >> >> >> > > not 'stable'. Please checkout the stable branch with 'hg update > >> >> >> > > stable' or add --dev option (disable this check with the --no- > >> >> >> > > branchcheck option) > > >> >> >> > > I also tried putting --no-branchcheck or --dev but it didn't > >> >> >> > > seem to > >> >> >> > > help. > > >> >> >> > > Thank > > ... > > read more » -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to votca@googlegroups.com. To unsubscribe from this group, send email to votca+unsubscr...@googlegroups.com. For more options, visit this group at http://groups.google.com/group/votca?hl=en.