Re: [Jmol-users] display echo while calculating

2014-01-17 Thread Rolf Huehne
On 01/16/2014 08:20 PM, Robert Hanson wrote: http://chemapps.stolaf.edu/jmol/zip/jmol-14.1.6_2014.01.16b.zip --- should fix this refeshing problem. It seems like it does in the 'Jena3D Viewer' (http://jenalib.fli-leibniz.de/cgi-bin/3d_mapping.pl?CODE=3croAPPLET=html5JMOLVERSION=14.1.6beta)

Re: [Jmol-users] display echo while calculating

2014-01-17 Thread Robert Hanson
well, then it is a caching problem on your end.-- refresh() now does a 10-ms delay itself. So there cannot be any difference between refresh and delay 0.01. Check on your page jmolApplet0._applet.viewer.eval.refresh.toString() That should report: function

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Jaime Prilusky
This might explain the erratic behaviour. It seems to work now and then, with not clear pattern. Eve the simple example by Angel at http://wiki.jmol.org/index.php/Loading_Notice , pasted in JSmol Console, is not working. It will freeze while calculating, render the surface, and maybe draw and

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Rolf Huehne
On 01/16/2014 06:14 PM, Jaime Prilusky wrote: This might explain the erratic behaviour. It seems to work now and then, with not clear pattern. Eve the simple example by Angel at http://wiki.jmol.org/index.php/Loading_Notice , pasted in JSmol Console, is not working. It will freeze while

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Rolf Huehne
On 01/16/2014 06:14 PM, Jaime Prilusky wrote: This might explain the erratic behaviour. It seems to work now and then, with not clear pattern. Eve the simple example by Angel at http://wiki.jmol.org/index.php/Loading_Notice , pasted in JSmol Console, is not working. It will freeze while

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Robert Hanson
then that's a bug. That should work perfectly. Bob -- Robert M. Hanson Larson-Anderson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs,

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Jaime Prilusky
Rolf: Thank you for testing on other browsers and platforms. While developing I stay on Mac. Bob: I hope that this detailed report might help you find a solution for the problem. Jaim On Jan 16, 2014, at 8:14 PM, Rolf Huehne rhue...@fli-leibniz.de wrote: On 01/16/2014 06:14 PM, Jaime

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Robert Hanson
Yes, I think I found it. *delay 0.01 *should work even though *refresh *does not: *set echo top leftecho working...* *delay 0.01* *echo* Please try that; I'll also get *refresh *working. Testing now. On Thu, Jan 16, 2014 at 1:27 PM, Jaime Prilusky jaime.prilu...@weizmann.ac.il wrote:

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Robert Hanson
http://chemapps.stolaf.edu/jmol/zip/jmol-14.1.6_2014.01.16b.zip --- should fix this refeshing problem. On Thu, Jan 16, 2014 at 2:01 PM, Robert Hanson hans...@stolaf.edu wrote: Yes, I think I found it. *delay 0.01 *should work even though *refresh *does not: *set echo top leftecho

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Jaime Prilusky
Thank you for the new version. I would say that now the sequence is as follows: it starts calculating the surface, freezing the browser then appears the message, draws, disappears the message. The message should appear before starting the long calculation time. Again, this is on Mac. Maybe

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Jaime Prilusky
Dear Bob, On Safari Mac, with jsmol 14.1.6_dev_2014.01.16 , the notice while working performs great with delay 0.1 instead of refresh Thank you for the suggestion. Jaim On Jan 16, 2014, at 10:10 PM, Jaime Prilusky jaime.prilu...@weizmann.ac.ilmailto:jaime.prilu...@weizmann.ac.il wrote: Thank

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Robert Hanson
nah. impossible. I wonder if what you are seeing is the time it takes to load the modular components. If you have turned off the loading monitor, you may think nothing is happening -- or the calculation has started. I have a quite variable connection here in Jamaica (especially working through my

Re: [Jmol-users] display echo while calculating

2014-01-16 Thread Jaime Prilusky
I would say that this is not a delay caused by loading, unless modules or model get unloaded in the middle. The Scene Authoring Tool in Proteopedia allows me to render and remove isosurface over and over again on the same loaded model with the click of a button. All components should be

[Jmol-users] display echo while calculating

2014-01-15 Thread Jaime Prilusky
I would like to have a message “Working …” while Jmol is calculating and rendering. The following script displays the message only while rendering. There’s no message while calculating. I’ve added some refresh commands just in case, but same result. Tried with different representations

Re: [Jmol-users] display echo while calculating

2014-01-15 Thread Rolf Huehne
On 01/15/2014 12:18 PM, Jaime Prilusky wrote: I would like to have a message “Working …” while Jmol is calculating and rendering. The following script displays the message only while rendering. There’s no message while calculating. I’ve added some refresh commands just in case, but same

Re: [Jmol-users] display echo while calculating

2014-01-15 Thread Jaime Prilusky
Thank you for a prompt reply, but it’s not working for me on 14.0.5. The command waitmessage is undocumented. Maybe it’s something you added? On Jan 15, 2014, at 1:48 PM, Rolf Huehne rhue...@fli-leibniz.de wrote: On 01/15/2014 12:18 PM, Jaime Prilusky wrote: I would like to have a message

[Jmol-users] display echo while calculating WORKING Ok

2014-01-15 Thread Jaime Prilusky
Please disregard previous mail. Your suggestion of using waitmessage works perfect. Thank you again, Jaim On Jan 15, 2014, at 3:06 PM, Jaime Prilusky jaime.prilu...@weizmann.ac.il wrote: Thank you for a prompt reply, but it’s not working for me on 14.0.5. The command waitmessage is

Re: [Jmol-users] display echo while calculating

2014-01-15 Thread Rolf Huehne
On 01/15/2014 02:06 PM, Jaime Prilusky wrote: Thank you for a prompt reply, but it’s not working for me on 14.0.5. The command waitmessage is undocumented. Maybe it’s something you added? Yes, its a Jena3D-specific addition to JSmol.min.js I made: I just updated the 'Jena3D Viewer' to Jmol

Re: [Jmol-users] display echo while calculating

2014-01-15 Thread Robert Hanson
echo and refresh will certainly work for this. But realize that there is no updating it, because the calculation is not interruptable at all, including updating any such message. On Wed, Jan 15, 2014 at 6:18 AM, Jaime Prilusky jaime.prilu...@weizmann.ac.il wrote: I would like to have a