[Jmol-users] can JSMOL be used into the Joomla CMS?

into the Joomla CMS, I would take the opportunity of the Bob's request for a review into the sourceforge site to write something and cite also this opportunitty to use JSMOL into the Joomla CMS container, obviously when I will get it working... ;) Sorry to bother you, Best regards, Pierluigi Quagliotto

Re: [Jmol-users] can JSMOL be used into the Joomla CMS?

it could help to solve problems and to get new ideas, like your code helped me). Many thanks again! Best regards, Pierluigi Quagliotto Inviato da iPad Il giorno 14/mar/2014, alle ore 00:01, Robert Hanson hans...@stolaf.edu ha scritto: Pierluigi, Welcome! That message indicates

Re: [Jmol-users] can JSMOL be used into the Joomla CMS?

of Joomla and people searching for both Joomla and chemistry will be aware of JSMol! Many thanks for your kindness and for the help! Best regards, Pierluigi Quagliotto At 00.01 14/03/2014, you wrote: into the Joomla CMS? Dr. Pierluigi Quagliotto - Ph.D. in Chemical Sciences Faculty Researcher

Re: [Jmol-users] R: can JSMOL be used into the Joomla CMS?

, I would take the opportunity of the Bob's request for a review into the sourceforge site to write something and cite also this opportunitty to use JSMOL into the Joomla CMS container, obviously when I will get it working... ;) Sorry to bother you, Best regards, Pierluigi Quagliotto

Re: [Jmol-users] R: can JSMOL be used into the Joomla CMS?

. Pierluigi Quagliotto - Ph.D. in Chemical Sciences Faculty Researcher Università degli Studi di Torino Dipartimento di Chimica via Pietro Giuria 7, 10125-TORINO - Italy Tel. 0039-011-6707593 Fax 0039-011-6707591 First Personal Fax: 0039-011-2367593 Second Fax 0039-02-700448783 E-Mail

Re: [Jmol-users] R: can JSMOL be used into the Joomla CMS?

Dear Angel, That's OK. We will see what I will be able to obtain...! The local version of the site works properly now, with JSMol. I would hope to get my site on-line in a fast way, to obtain final considerations and to let you see the final results. The use of JSME and JSMol in this site is

Re: [Jmol-users] NMR predictions

The same happened to me on iPad first and after on PC and Mac. Best regards, Pierluigi Quagliotto Inviato da iPad Il giorno 05/apr/2014, alle ore 18:16, Pshemak Maslak n...@psu.edu ha scritto: http://chemapps.stolaf.edu/jmol/jsmol/jsv_jme.htm http://chemapps.stolaf.edu/jmol/jsmol

Re: [Jmol-users] NMR predictions

Bob, many thanks for your information about the EPFL server failure. Regards, Pierluigi Quagliotto At 22.48 05/04/2014, you wrote: This indicates a server failure. The direct test of that site is http://chemapps.stolaf.edu/jmol/jsmol/testEPFL.htmhttp://chemapps.stolaf.edu/jmol/jsmol

Re: [Jmol-users] Apology, and request for help

Sorry for some unwanted english mistakes, but I am writing from iPad and the automated corrector changed something here and there Inviato da iPad Il giorno 16/mag/2014, alle ore 21:34, Pierluigi Quagliotto pierluigi.quaglio...@unito.it ha scritto: Dear Brenton, and Dear Angel

Re: [Jmol-users] support needed -- XHR -- asynchronous vs synchronous

... ...but if you think that the users can play a role, it would be a pleasure to be of help. Please let me know and I will try to send a message. Bye, Pierluigi Quagliotto 2014-08-31 13:02 GMT+02:00 Jaime Prilusky jaime.prilu...@weizmann.ac.il: Bob, Can you please provide a template letter

Re: [Jmol-users] support needed -- XHR -- asynchronous vs synchronous

, 2014 at 8:30 PM, Pierluigi Quagliotto pierluigi.quaglio...@unito.it wrote: Dear Bob, Would it be opportune and sufficient an intervention by someone like me, who have not so great programming skills? I could stress the importance of JMol/JSMol even for simple projects devoted to education

Re: [Jmol-users] Adding double bonds to Jmol's loading of PDB files and formatting said double bonds

In effect, it would be interesting to set up JMol to use aromatic character as a default when it has to work with organic structures. When I use it in the classical way, receving the molecule from JSME through a call to an external server (NIH server), the 3D model shows the double ond sof

Re: [Jmol-users] Pure Fun Project

with MEP surfaces If it was possible to make very simple semi-empirical calculations to let student to see and interact with the molecular orbitals, this could be of great help for them and for the teacher also... Wonderful job! Please let us know about novel improvements Bye, Pierluigi

Re: [Jmol-users] fun with Jmol -- xxxx.find("chemical",...)

Dear Bob, many thanks! I will update the JSMol version on my site and I will try to implement this feature. It should be amazing to have a naming feature that could give IUPAC names to every (almost...) structure we can draw. I will imagine this is quite difficult to implement. However this

Re: [Jmol-users] fun with Jmol -- xxxx.find("chemical",...)

Dear Bob and dear all, is it possible to use the same feature in JSmol associating it to a button?. It would be interesting to use it to help students during nomenclature exercises. Thanks! Pierluigi 2016-03-22 19:04 GMT+01:00 Luciano Abriata : > Robert, no, I

Re: [Jmol-users] fun with Jmol -- xxxx.find("chemical",...)

Dear All, many thanks for your kind attention and all time you lost to give me some info about the whole problem, I had a look to the pages Otis and Bob linked, referring also to the new topic "Let's Not Forget PubChem". First of all, I was not fully aware of the integration of OPSIN into the

Re: [Jmol-users] fun with Jmol -- xxxx.find("chemical",...)

Pierluigi 2016-03-24 14:48 GMT+01:00 Robert Hanson <hans...@stolaf.edu>: > Great, yes. > > I use this feature in class a lot when I am teaching organic chemistry. > > On Thu, Mar 24, 2016 at 4:05 AM, Pierluigi Quagliotto < > pierluigi.quaglio...@unito.it>

Re: [Jmol-users] Jmol 14.12.1 released -- R/S chirality

Many thanks, Bob! Bye! Pierluigi Il 08/04/2017 03:54, Robert Hanson ha scritto: https://sourceforge.net/projects/jmol/files/Jmol/Version%2014.12/Jmol%2014.12.1/ Jmol.___JmolVersion="14.12.1" bug fix: NBO update bug fix: JavaScript bug - missing Math.signum(f) - causes {atom}.chirality

Re: [Jmol-users] R: Re: Jmol 14.12.1 released -- R/S chirality

eavily validated using some excellent extreme examples provided by Mikko Vainio that caught a couple of bugs. On Sun, Apr 9, 2017 at 3:46 AM, Pierluigi Quagliotto <pierluigi.quaglio...@unito.it <mailto:pierluigi.quaglio...@unito.it>> wrote: Many thanks, Bob!

Re: [Jmol-users] Cahn-Ingold-Prelog priority rules

:20 AM, Pierluigi Quagliotto <pierluigi.quaglio...@unito.it <mailto:pierluigi.quaglio...@unito.it>> wrote: Dear All, I prepared a page for students (on my developing server: http://5.135.186.232/STdM/index.php/it/esercizi/esercitarsi-sulla-chiralita <http://5.1

Re: [Jmol-users] check R/S chirality with Jmol

ot support the property or the method 'printStackTrace' label %[chirality] /8 atoms selected/ I simply transferred the jsmol dir on the server, as usual and gave proper 755 permission and apache.apache ownership. JSMol seems to work fine but ht euse of the new function gave this error. Bye,

Re: [Jmol-users] R: Re: Jmol 14.12.1 released -- R/S chirality

another version of Jmol later today that has been pretty heavily validated using some excellent extreme examples provided by Mikko Vainio that caught a couple of bugs. On Sun, Apr 9, 2017 at 3:46 AM, Pierluigi Quagliotto <pierluigi.quaglio...@unito.it <mailto:pi

Re: [Jmol-users] Jmol 14.13.1

Dear Bob, many thanks for the crucial update! Yesterday I have published on the site the page for the step-by-step chirality assignment procedure. It should be intended for compound having only one chiral carbon since I did not implemented yet any function to take into account the presence

Re: [Jmol-users] Jmol 14.13.1

Dear Bob, Sorry... I forgot to add the address of the production site: http://www.iorgchem.unito.it/index.php/en/exercises/practice-on-chirality bye! Pierluigi il 10/04/2017 04:44, Robert Hanson ha scritto: https://sourceforge.net/projects/jmol/files/Jmol/Version%2014.13/Jmol%2014.13.1/

Re: [Jmol-users] Jmol 14.14.1

Many thanks, Bob! Wonderful news! I am waiting for the availability of the release to imrpove my page on chirality and to prepare also a page to introduce all the steps needed to assign E/Z configurations. Bye! Pierluigi Il 20/04/2017 06:28, Robert Hanson ha scritto:

Re: [Jmol-users] R: check R/S chirality with Jmol

select on chirality != "" label %[chirality] /8 atoms selected/ Thanks to Pierluigi Quagliotto for the suggestion to tackle this. It was a good challenge getting it right. Please test! Bob

Re: [Jmol-users] Cahn-Ingold-Prelog priority rules

let you know when the page will be ready, just to see it "at work". Bye! Pierluigi Quagliotto Il 07/04/2017 01:21, Robert Hanson ha scritto: This is done. Jmol.___JmolVersion="14.12.0" // 2017-04-06 new feature: {atom}.chirality -- uses Cohen-Ingold-Prelog ru

Re: [Jmol-users] R: check R/S chirality with Jmol

/R/ load $cholesterol select on chirality != "" label %[chirality] /8 atoms selected/ Thanks to Pierluigi Quagliotto for the suggestion to tackle this. It was a good challenge getting it right. Pl