Hi guys, I was trying to convert BrainArray custom CDF for Affy HT_HG- U133_Plus_PM chip into binary CDF using convertCdf(). But every time I tried, I got the same error message:
R for Windows GUI front-end: R for Windows GUI front-end has encountered a problem and needs to close. Error Signature: AppName: rgui.exe AppVer: 2.130.55427.0 ModName: affxparser.dll ModVer: 0.0.0.0 OffSet: 0005207a In the R GUI window: > library(affxparser) > convertCdf("HTHGU133PlusPM_Hs_ENTREZG.cdf", > "HTHGU133PlusPM_Hs_ENTREZG,Binary.cdf", + version = 4,force = TRUE,verbose=TRUE) Reading CDF header... Reading CDF header...done Reading CDF QC units... It hangs like that forever and nothing happens. I got this eror only when I tried to convert BrainArray's custom CDF for Affy HT_HG-U133_Plus_PM chip. I tried ENTREZG and REFSEQ versions of the custom CDF and got the same error message. I had no problem when converting the custom CDF for HG-U133_Plus_2 chip. Since R hangs every time the error message pops up, I could not provide any sessionInfo() info. My computer runs windows XP 32 bit with the latest R. Any suggestion? Thanks a lot for the help! Ying -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/