Thanks for reporting this Alistair - I have responded to the comment on the documentation page you referred to (https://wiki.duraspace.org/pages/viewpage.action?pageId=30217519).
The JAR file itself is not corrupt, but the link to fcrepo-drupalauthfilter-3.4.2.jar on the GitHub page (https://github.com/islandora-deprecated/islandora-dist/tree/master/servlet_filter) is not itself a download link. Rather, it takes you to the GitHub page for the file - from there you can click on the 'raw' link to download the raw file (https://github.com/islandora-deprecated/islandora-dist/raw/master/servlet_filter/fcrepo-drupalauthfilter-3.4.2.jar). This is the same link referred to in the comment on the doc page as the correct one. So if you downloaded https://github.com/islandora-deprecated/islandora-dist/blob/master/servlet_filter/fcrepo-drupalauthfilter-3.4.2.jar directly you would indeed get a corrupt JAR file because it would just be HTML. This is a bit confusing, so I'll update the docs to be more specific about how to download the fcrepo-drupalauthfilter-3.4.2.jar. Hope this helps! David On Mon, Jan 23, 2012 at 10:17 AM, Michael Della Bitta <michaeldellabi...@nypl.org> wrote: > Glad you figured it out despite my help. :) > > On Jan 23, 2012 9:16 AM, "Alistair Young" <alistair.yo...@uhi.ac.uk> wrote: >> >> gadzooks m'lud. They're only serving up corrupt jar files! There's a link >> in the comments at the bottom of the wiki that states this! The other link >> the commenter provides works. Presumably they'll update either the jars or >> the documentation... >> >> Alistair >> >> -- >> mov eax,1 >> mov ebx,0 >> int 80h >> >> >> >> >> On 23 Jan 2012, at 12:16, Alistair Young wrote: >> >> > thanks Michael but the presence of the drupal filter does seem to take >> > Fedora down. If Fedora messaging is enabled it also runs out of memory. >> > Without messaging fedora tries to restart when it detects the filter and >> > then crashes: >> > >> > ************************** >> > ** FEDORA STARTUP ERROR ** >> > ************************** >> > >> > Fedora startup failed >> > org.fcrepo.server.errors.ServerInitializationException: >> > java.lang.RuntimeException: >> > org.fcrepo.server.Server.<init>(Server.java:673) >> > org.fcrepo.server.BasicServer.<init>(BasicServer.java:41) >> > sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) >> > >> > sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) >> > >> > sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) >> > java.lang.reflect.Constructor.newInstance(Constructor.java:513) >> > org.fcrepo.server.Server.getInstance(Server.java:1001) >> > org.fcrepo.server.ServerController.init(ServerController.java:402) >> > javax.servlet.GenericServlet.init(GenericServlet.java:212) >> > >> > org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1206) >> > org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1026) >> > >> > org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4421) >> > >> > org.apache.catalina.core.StandardContext.start(StandardContext.java:4734) >> > >> > org.apache.catalina.core.StandardContext.reload(StandardContext.java:3461) >> > >> > org.apache.catalina.loader.WebappLoader.backgroundProcess(WebappLoader.java:426) >> > >> > org.apache.catalina.core.ContainerBase.backgroundProcess(ContainerBase.java:1361) >> > >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1653) >> > >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1662) >> > >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1662) >> > >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.run(ContainerBase.java:1642) >> > java.lang.Thread.run(Thread.java:662) >> > >> > at org.fcrepo.server.Server.getInstance(Server.java:1044) >> > at >> > org.fcrepo.server.ServerController.init(ServerController.java:402) >> > at javax.servlet.GenericServlet.init(GenericServlet.java:212) >> > at >> > org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1206) >> > at >> > org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1026) >> > at >> > org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4421) >> > at >> > org.apache.catalina.core.StandardContext.start(StandardContext.java:4734) >> > at >> > org.apache.catalina.core.StandardContext.reload(StandardContext.java:3461) >> > at >> > org.apache.catalina.loader.WebappLoader.backgroundProcess(WebappLoader.java:426) >> > at >> > org.apache.catalina.core.ContainerBase.backgroundProcess(ContainerBase.java:1361) >> > at >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1653) >> > at >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1662) >> > at >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.processChildren(ContainerBase.java:1662) >> > at >> > org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor.run(ContainerBase.java:1642) >> > at java.lang.Thread.run(Thread.java:662) >> > >> > 23-Jan-2012 12:14:27 org.apache.catalina.loader.WebappClassLoader >> > modified >> > INFO: Additional JARs have been added : >> > 'fcrepo-drupalauthfilter-3.4.2.jar' >> > 23-Jan-2012 12:14:27 org.apache.catalina.core.StandardContext reload >> > INFO: Reloading Context with name [/fedora] has started >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearReferencesThreads >> > SEVERE: The web application [/fedora] appears to have started a thread >> > named [MySQL Statement Cancellation Timer] but has failed to stop it. This >> > is very likely to create a memory leak. >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearReferencesThreads >> > SEVERE: The web application [/fedora] appears to have started a thread >> > named [JotmBatch] but has failed to stop it. This is very likely to create >> > a >> > memory leak. >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearReferencesThreads >> > SEVERE: The web application [/fedora] appears to have started a thread >> > named [JotmClock] but has failed to stop it. This is very likely to create >> > a >> > memory leak. >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearReferencesThreads >> > SEVERE: The web application [/fedora] appears to have started a thread >> > named [Write-lock Reaper] but has failed to stop it. This is very likely to >> > create a memory leak. >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearThreadLocalMap >> > SEVERE: The web application [/fedora] created a ThreadLocal with key of >> > type [ch.qos.logback.core.UnsynchronizedAppenderBase$1] (value >> > [ch.qos.logback.core.UnsynchronizedAppenderBase$1@1d6733c]) and a value of >> > type [java.lang.Boolean] (value [false]) but failed to remove it when the >> > web application was stopped. This is very likely to create a memory leak. >> > 23-Jan-2012 12:14:29 org.apache.catalina.loader.WebappClassLoader >> > clearThreadLocalMap >> > SEVERE: The web application [/fedora] created a ThreadLocal with key of >> > type [org.apache.axis.utils.XMLUtils.ThreadLocalDocumentBuilder] (value >> > [org.apache.axis.utils.XMLUtils$ThreadLocalDocumentBuilder@27a180]) and a >> > value of type [org.apache.xerces.jaxp.DocumentBuilderImpl] (value >> > [org.apache.xerces.jaxp.DocumentBuilderImpl@1dc0fec]) but failed to remove >> > it when the web application was stopped. This is very likely to create a >> > memory leak. >> > >> > >> > >> > -- >> > mov eax,1 >> > mov ebx,0 >> > int 80h >> > >> > >> > >> > >> > On 23 Jan 2012, at 12:02, Michael Della Bitta wrote: >> > >> >> Hello, Alistair, >> >> >> >> A number of those memory leak errors will happen as a matter of >> >> course... I see them in our install. They may be a red herring... Have >> >> you tried adding " -XX:+HeapDumpOnOutOfMemoryError" to your JVM args? >> >> That will dump a file when the process runs out of RAM that shows what >> >> was tying things up. >> >> >> >> Michael Della Bitta >> >> >> >> Senior Applications Developer >> >> Information Technology Group >> >> The New York Public Library >> >> 40 West 20th Street, 5th Floor >> >> New York, NY 10011-4211 >> >> (212) 621-0609 >> >> >> >> >> >> >> >> On Mon, Jan 23, 2012 at 6:51 AM, Alistair Young >> >> <alistair.yo...@uhi.ac.uk> wrote: >> >>> I switched to Fedora 3.4.2 and removed gsearch and narrowed it down >> >>> to: >> >>> >> >>> fcrepo-drupalauthfilter-3.4.2.jar >> >>> >> >>> Has anyone come across this before? >> >>> >> >>> 23-Jan-2012 11:49:06 org.apache.catalina.loader.WebappClassLoader >> >>> modified >> >>> INFO: Additional JARs have been added : >> >>> 'fcrepo-drupalauthfilter-3.4.2.jar' >> >>> 23-Jan-2012 11:49:06 org.apache.catalina.core.StandardContext reload >> >>> INFO: Reloading Context with name [/fedora] has started >> >>> 23-Jan-2012 11:49:09 org.apache.catalina.loader.WebappClassLoader >> >>> clearReferencesThreads >> >>> SEVERE: The web application [/fedora] appears to have started a thread >> >>> named [MySQL Statement Cancellation Timer] but has failed to stop it. >> >>> This >> >>> is very likely to create a memory leak. >> >>> 23-Jan-2012 11:49:09 org.apache.catalina.loader.WebappClassLoader >> >>> clearThreadLocalMap >> >>> SEVERE: The web application [/fedora] created a ThreadLocal with key >> >>> of type [ch.qos.logback.core.UnsynchronizedAppenderBase$1] (value >> >>> [ch.qos.logback.core.UnsynchronizedAppenderBase$1@f180d9]) and a value of >> >>> type [java.lang.Boolean] (value [false]) but failed to remove it when the >> >>> web application was stopped. This is very likely to create a memory leak. >> >>> 23-Jan-2012 11:49:09 org.apache.catalina.loader.WebappClassLoader >> >>> clearThreadLocalMap >> >>> SEVERE: The web application [/fedora] created a ThreadLocal with key >> >>> of type [org.apache.axis.utils.XMLUtils.ThreadLocalDocumentBuilder] >> >>> (value >> >>> [org.apache.axis.utils.XMLUtils$ThreadLocalDocumentBuilder@1426497]) and >> >>> a >> >>> value of type [org.apache.xerces.jaxp.DocumentBuilderImpl] (value >> >>> [org.apache.xerces.jaxp.DocumentBuilderImpl@1da11d8]) but failed to >> >>> remove >> >>> it when the web application was stopped. This is very likely to create a >> >>> memory leak. >> >>> >> >>> >> >>> thanks, >> >>> >> >>> Alistair >> >>> >> >>> -- >> >>> mov eax,1 >> >>> mov ebx,0 >> >>> int 80h >> >>> >> >>> >> >>> >> >>> >> >>> On 23 Jan 2012, at 10:45, Alistair Young wrote: >> >>> >> >>>> Would anyone know why this is the case? The log fills with this error >> >>>> on every startup and within 30s tomcat runs out of memory. I'm running >> >>>> fedora 3.5 with a drupal filter for allowing drupal admins to get at it. >> >>>> Also running gsearch 2.4. >> >>>> >> >>>> SEVERE: The web application [/fedora] created a ThreadLocal with key >> >>>> of type [org.slf4j.impl.CopyOnInheritThreadLocal] (value >> >>>> [org.slf4j.impl.CopyOnInheritThreadLocal@1e8b327]) and a value of type >> >>>> [java.util.HashMap] (value [{activemq.broker=localhost}]) but failed to >> >>>> remove it when the web application was stopped. This is very likely to >> >>>> create a memory leak. >> >>>> >> >>>> thanks, >> >>>> >> >>>> Alistair >> >>>> >> >>>> >> >>>> -- >> >>>> mov eax,1 >> >>>> mov ebx,0 >> >>>> int 80h >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> ------------------------------------------------------------------------------ >> >>>> Try before you buy = See our experts in action! >> >>>> The most comprehensive online learning library for Microsoft >> >>>> developers >> >>>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >> >>>> MVC3, >> >>>> Metro Style Apps, more. Free future releases when you subscribe now! >> >>>> http://p.sf.net/sfu/learndevnow-dev2 >> >>>> _______________________________________________ >> >>>> Fedora-commons-users mailing list >> >>>> Fedora-commons-users@lists.sourceforge.net >> >>>> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users >> >>> >> >>> >> >>> >> >>> ------------------------------------------------------------------------------ >> >>> Try before you buy = See our experts in action! >> >>> The most comprehensive online learning library for Microsoft >> >>> developers >> >>> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, >> >>> MVC3, >> >>> Metro Style Apps, more. 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Free future releases when you subscribe now! >> >> http://p.sf.net/sfu/learndevnow-dev2 >> >> _______________________________________________ >> >> Fedora-commons-users mailing list >> >> Fedora-commons-users@lists.sourceforge.net >> >> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users >> > >> > >> > >> > ------------------------------------------------------------------------------ >> > Try before you buy = See our experts in action! >> > The most comprehensive online learning library for Microsoft developers >> > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> > Metro Style Apps, more. Free future releases when you subscribe now! >> > http://p.sf.net/sfu/learndevnow-dev2 >> > _______________________________________________ >> > Fedora-commons-users mailing list >> > Fedora-commons-users@lists.sourceforge.net >> > https://lists.sourceforge.net/lists/listinfo/fedora-commons-users >> >> >> >> ------------------------------------------------------------------------------ >> Try before you buy = See our experts in action! >> The most comprehensive online learning library for Microsoft developers >> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, >> Metro Style Apps, more. Free future releases when you subscribe now! >> http://p.sf.net/sfu/learndevnow-dev2 >> _______________________________________________ >> Fedora-commons-users mailing list >> Fedora-commons-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users > > > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2 > _______________________________________________ > Fedora-commons-users mailing list > Fedora-commons-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/fedora-commons-users > -- David Wilcox, BA, MLIS Islandora Training/Support Coordinator Robertson Library University of Prince Edward Island dwil...@upei.ca Skype Name: david.wilcox82 902.620.5167 ------------------------------------------------------------------------------ Try before you buy = See our experts in action! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. 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