On Wed, May 2, 2012 at 9:58 PM, Anne Pajon <anne.pa...@cancer.org.uk> wrote: > Hi Peter, > > Thanks for the clarification, it is really helpful. > > Would you mind sharing what needs to be done in > term of configuration and instalation to transform > the galaxy server into a submitting job to the cluster? > Thanks.
You said you have an LSF cluster - so I have no idea, sorry :( We're using SGE here. I'm presuming similar concepts apply - in our case a key step was getting qsub/qstat/qdel to work from the Galaxy server as well as the cluster head node - which required our cluster administrator to setup our Galaxy server as an SGE submit node. Regards, Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/