Re: [OMPI devel] RFC: new OMPI RTE define:

2014-02-18 Thread Brian Barrett
al/mca/mca.h" > #include "opal/mca/base/base.h" > +#include "opal/mca/event/event.h" > > BEGIN_C_DECLS > > > > ___ > devel mailing list > de...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/devel > -- Brian Barrett There is an art . . . to flying. The knack lies in learning how to throw yourself at the ground and miss. Douglas Adams, 'The Hitchhikers Guide to the Galaxy'

Re: [OMPI devel] oshmem test suite errors

2014-02-20 Thread Brian Barrett
complete, and I've got to keep working on my own features for v1.7.5, so > I need to move to other things right now. These start to sound like issues in the code; those last two are pretty decent tests. > I think I have oshmem running well enough to add these to Cisco's nightly M

Re: [OMPI devel] 1.3 PML default choice

2009-01-13 Thread Brian Barrett
On Jan 13, 2009, at 5:48 PM, Patrick Geoffray wrote: Jeff Squyres wrote: Gaah! I specifically asked Patrick and George about this and they said that the README text was fine. Grr... When I looked at that time, I vaguely remember that _both_ PMLs were initialized but CM was eventually use

Re: [OMPI devel] 1.3 PML default choice

2009-01-13 Thread Brian Barrett
). What Brian describe is the best compromise we manage to find few months ago. If you want to get the MX CM to run, you will have to clearly specify on the command line --mca pml cm. All other MTL will have the behavior described on the README. george. On Jan 13, 2009, at 20:18 , Brian Barr

Re: [OMPI devel] RFC: sm Latency

2009-01-20 Thread Brian Barrett
I unfortunately don't have time to look in depth at the patch. But my concern is that currently (today, not at some made up time in the future, maybe), we use the BTLs for more than just MPI point-to- point. The rdma one-sided component (which was added for 1.3 and hopefully will be the de

Re: [OMPI devel] RFC: Move of ompi_bitmap_t

2009-01-30 Thread Brian Barrett
evel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] RFC: Move of ompi_bitmap_t

2009-02-01 Thread Brian Barrett
s is being done on a tmp branch only until everything is in order I think we need further discussions. --td Brian Barrett wrote: So once again, I bring up my objection of this entire line of moving until such time as the entire process is properly mapped out. I believe it's premature to

Re: [OMPI devel] RFC: Move of ompi_bitmap_t

2009-02-01 Thread Brian Barrett
y D. Dontje" wrote: I second Brian's concern. So unless this is just an announcement that this is being done on a tmp branch only until everything is in order I think we need further discussions. --td Brian Barrett wrote: So once again, I bring up my objection of this entire line

Re: [OMPI devel] 1.3.1 blocker

2009-03-13 Thread Brian Barrett
mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel ___ devel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] require newer autoconf?

2009-03-17 Thread Brian Barrett
I'd rather not. I have a couple of platforms with 2.59 installed, but not 2.60+. I really don't want to have to install my own autotools because of some bug that doesn't affect me. I don't, however, have a problem with forcing users to upgrade in order to get support for build-related iss

Re: [OMPI devel] Revise paffinity method?

2009-05-08 Thread Brian Barrett
Jumping in late (travelling this morning). I think this is the right answer :). Brian -- Brian Barrett There is an art . . . to flying. The knack lies in learning how to throw yourself at the ground and miss. On May 8, 2009, at 9:45, Ralph Castain wrote: I think that's the way to go

Re: [OMPI devel] RFC: Warn user about deprecated MPI functionality and "wrong" compiler usage

2009-05-18 Thread Brian Barrett
tever, to work around optimizer bugs. This is functionality I don't think should be lost just to warn about deprecated functions. Brian -- Brian Barrett There is an art . . . to flying. The knack lies in learning how to throw yourself at the ground and miss. On May 18, 2009, at 1:

Re: [OMPI devel] CMR one-sided changes? (r21134)

2009-05-20 Thread Brian Barrett
Yeah, putting together a CMR is on the todo list :). Brian -- Brian Barrett There is an art . . . to flying. The knack lies in learning how to throw yourself at the ground and miss. On May 20, 2009, at 12:41, Jeff Squyres wrote: Brian: can we CMR over your OSD changes from 30 Apr

Re: [OMPI devel] trac ticket 1944 and pending sends

2009-06-24 Thread Brian Barrett
Or go to what I proposed and USE A LINKED LIST! (as I said before, not an original idea, but one I think has merit) Then you don't have to size the fifo, because there isn't a fifo. Limit the number of send fragments any one proc can allocate and the only place memory can grow without bo

Re: [OMPI devel] Updating the trunk

2009-06-30 Thread Brian Barrett
On Jun 30, 2009, at 5:57 PM, Ralph Castain wrote: If you are updating a prior checkout of the OMPI trunk with r21568, please be aware that there is an additional step required to make it build. Due to a quirk of the build system, you will need to do: rm ompi/tools/ompi_info/.deps/* and the

Re: [OMPI devel] Device failover on ob1

2009-08-02 Thread Brian Barrett
-mpi.org/mailman/listinfo.cgi/devel ___ devel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] IPv6 support in OpenMPI?

2006-03-31 Thread Brian Barrett
use orterun to launch normal old unix commands. Something with a bit of stdio output will give a reasonable first test of the oob. I usually do something like: orterun -np 2 -host host_a,host_b ls -l $HOME as I have enough files in my home directory that a page or two of standard I/O shou

Re: [OMPI devel] IPv6 support in OpenMPI?

2006-03-31 Thread Brian Barrett
I'll admit it has been a year or so since I've looked at this, so I could be completely off base there. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] IPv6 support in OpenMPI?

2006-03-31 Thread Brian Barrett
On Mar 31, 2006, at 10:15 AM, Adrian Knoth wrote: On Fri, Mar 31, 2006 at 09:36:31AM -0500, Jeff Squyres (jsquyres) wrote: I have no personal experience with IPv6, but one thought that strikes me is that the components might be able to figure out what to do by looking at/parsing either t

Re: [OMPI devel] IPv6 support in OpenMPI?

2006-03-31 Thread Brian Barrett
IPv6 support, but I could be wrong there. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] Build is breaking

2006-04-06 Thread Brian Barrett
On Apr 6, 2006, at 11:21 AM, Sushant Sharma wrote: Just checked out fresh trunk and got this error. In file included from ../../ompi-trunk/opal/runtime/opal_finalize.c: 33: ../../ompi-trunk/opal/mca/memcpy/base/base.h:72:44: opal/mca/memcpy/base/base_impl.h: No such file or directory make[2]:

Re: [OMPI devel] [OT] padding and integer types

2006-04-10 Thread Brian Barrett
ly do the standard LP64 setup. So no worries there. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

[OMPI devel] Open MPI v1.1 branch created

2006-04-11 Thread Brian Barrett
affect the v1.1 release in any way, but thought I would mention it here. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

[OMPI devel] Subversion outage on Friday

2006-04-12 Thread Brian Barrett
. During this time, checkouts, updates, and checkins will not function properly. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] opal_event_loop exiting

2006-04-20 Thread Brian Barrett
bably give a better idea of exactly what is happening... Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] Pack data mismatch in file dps_unpack.c 95/121

2006-04-21 Thread Brian Barrett
Are these both identical architecture? Those look suspiciously like what happens when you're trying to mix 32/64 bit or little endian / big endian. Brian On Apr 20, 2006, at 8:53 PM, Galen M. Shipman wrote: Hey Guys, Not sure what is going on here, has anyone seen this before? - Galen

Re: [OMPI devel] Pack data mismatch in file dps_unpack.c 95/121

2006-04-22 Thread Brian Barrett
I'm just kind of guessing as to how one could get to that situation... Brian On Apr 21, 2006, at 5:01 PM, Manjunath G Venkata wrote: On Thu, 20 Apr 2006, Brian Barrett wrote: Are these both identical architecture? Those look suspiciously like what happens when you're trying to

[OMPI devel] Fwd: [all-osl-users] [Fwd: FW: Electrical Outage]

2006-04-26 Thread Brian Barrett
Hi all - We're going to lose all Open MPI resources hosted at IU (which is pretty much everything) on Saturday, May 13th. We don't have much we can do about this, as the university is cutting our power. So a Saturday off from development :). Brian Begin forwarded message: From: DongI

Re: [OMPI devel] How to test OpenMPI?

2006-05-02 Thread Brian Barrett
rse, you might want to start with something dead simple, like NetPIPE, and work your way up ;). Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] small configure nits

2006-05-07 Thread Brian Barrett
Probably means this was a problem in some ancient version of our environment and it never got changed. It looks reasonable, so I'll make it so. Which platforms will barf with the './config'? Trying to figure out which branches this needs to be committed to... Thanks, Brian On May 6, 20

[OMPI devel] [SPAM:### 81%] Re: typo in ompi/mca/io/romio/configure.m4?

2006-05-08 Thread Brian Barrett
. I'll let you know when the fixes become available Thanks, Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] typo in ompi/mca/io/romio/configure.m4?

2006-05-08 Thread Brian Barrett
On May 8, 2006, at 1:54 PM, Ralf Wildenhues wrote: Hi Brian, Dries, * Brian Barrett wrote on Mon, May 08, 2006 at 01:43:38PM CEST: However, we really *should* abort configure and warn the user if -- enable-io-romio is given and ROMIO fails to configure. I will fix this with the LDFLAGS fix

Re: [OMPI devel] [OMPI users] pnetcdf & Open MPI

2006-05-08 Thread Brian Barrett
tch to our development trunk. It should be in tomorrow morning's nightly tarball for any of the active release branches (the trunk, v1.0, and v1.1): http://www.open-mpi.org/nightly/ Thanks again, Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] typo in ompi/mca/io/romio/configure.m4?

2006-05-08 Thread Brian Barrett
previously stored value: Thanks for finding this one as well. A fix will be in tonight's nightly tarballs. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] bug in Makefile.in

2006-05-09 Thread Brian Barrett
I think I have this fixed (using the $file_system_[foo] variables). Thanks for all the bug reports. I've committed to the trunk and am building a new nightly tarball right now. Can you try it to make sure I have all your issues fixed? Thanks for all the bug reports! Brian On May 8, 200

Re: [OMPI devel] another small ROMIO fix...

2006-05-09 Thread Brian Barrett
) libadio_la_DEPENDENCIES = \ $(libadio_la_LIBADD) Greetings, Dries PS. This should be the last one, I finally have the combo Open MPI, ROMIO & PVFS2 over native IB up and running :-) Thanks. Fixed on the trunk, and hopefully moving into the release branches soon. Brian -- Brian Bar

Re: [OMPI devel] Non-threaded test fails with thread-safe library

2006-05-11 Thread Brian Barrett
Eeeks! That sounds like a bug. Can you attach a debugger and get a stack trace for the situation where that occurs? Brian On May 10, 2006, at 10:17 PM, Rolf Vandevaart wrote: I have built a library with "--enable-mpi-threads --with- threads=posix" (using the trunk) and tried running a s

[OMPI devel] Fwd: Lindley Power Outage Saturday, May 13th

2006-05-12 Thread Brian Barrett
Hi all - Due to our building losing power tomorrow, all OSL-provided services will be unavailable for the day. Since that's just about everything @open-mpi.org, just about everything will be down tomorrow. I apologize for the downtime - there is a new building going up next to ours and t

[OMPI devel] New bug tracker

2006-05-17 Thread Brian Barrett
nassigned bugs. For now, plan on receiving e-mails about unassigned bugs on Mondays and then hearing about them on the weekly telecon ;). Please let me know if you have any questions about the bug tracker. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] some configury update

2006-05-30 Thread Brian Barrett
As always, Thanks! Committed and hopefully moving to 1.1, as I'd like to eventually bootstap that branch with 2.60. Brian On May 30, 2006, at 9:51 AM, Ralf Wildenhues wrote: The following patches fix two rather nasty issues with configury, and one missing bit of GCS update. All changes sho

Re: [OMPI devel] process ordering/processes per node

2006-06-05 Thread Brian Barrett
more than one process per processor. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] Question on "get" operation

2006-06-07 Thread Brian Barrett
MPI_GET function, a stack trace and sample application would be most useful. Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] Problem compiling openmpi 1.1

2006-07-11 Thread Brian Barrett
On Mon, 2006-07-10 at 17:44 +0200, Pierre wrote: > rtsig.c:365: error: `EV_SIGNAL' undeclared (first use in this function) > rtsig.c:392: error: dereferencing pointer to incomplete type > rtsig.c:392: error: `EV_PERSIST' undeclared (first use in this function) > make[3]: *** [rtsig.lo] Error 1 > m

[OMPI devel] SVN breakage / new event library committed

2006-07-26 Thread Brian Barrett
Hi all - I just finished committing the event library into the trunk. Unfortunately, because the event library was not imported using a vendor import 2 years ago, I had to do some things that made SVN a little unhappy. The good news is that the next libevent update will not require thes

Re: [OMPI devel] universal / "fat" binary support?

2006-07-31 Thread Brian Barrett
On Thu, 2006-07-27 at 15:21 -0700, Ben Byer wrote: > I'd like to be able to build OpenMPI "fat" -- for multiple > architectures in one pass, so I can create a universal binary for > OSX. I see that it was mentioned last year, at http://www.open- > mpi.org/community/lists/users/2005/06/0087.ph

Re: [OMPI devel] progress thread check

2006-07-31 Thread Brian Barrett
On Thu, 2006-07-27 at 07:49 -0400, Graham E Fagg wrote: > Hi all > is there a single function call that components can use to check that the > progress thread is up and running ? Not really. But if the define OMPI_ENABLE_PROGRESS_THREADS is 1 and opal_using_threads() returns true, then it can

[OMPI devel] trunk changes: F90 shared libraries / New one-sided component

2006-08-02 Thread Brian Barrett
Hi all - Two large changes to the SVN trunk just occurred which require an autogen.sh on your part. First, we now (mostly) support building the Fortran 90 MPI bindings library as a shared library. This has been something Dan and I have been working on since the Burlington meeting, and it's ready

Re: [OMPI devel] one-sided communication implementation

2006-08-14 Thread Brian Barrett
On Thu, 2006-07-20 at 11:56 +1000, gh rory wrote: > In the process of trying to create a wrapper for open mpi to another > language. Specifically, I am trying to understand how the remote > memory access/one-sided communication works in open mpi 1.1, and I am > having some trouble. > > I have

[OMPI devel] Open MPI v1.2 branch started

2006-08-15 Thread Brian Barrett
Hello all - The release branch for the v1.2 release of Open MPI was created this afternoon. The branch was created from r11198 of the trunk. A couple of minor changes have been made to the v1.2 branch that did not go through the ordinary branch release process: * remove btl:ud and pls:xcpu co

Re: [OMPI devel] exit declaration in configure tests

2006-08-21 Thread Brian Barrett
On Mon, 2006-08-21 at 09:38 +0200, Ralf Wildenhues wrote: > Revision 11268 makes me curious: > > |M /trunk/config/ompi_setup_cxx.m4 > | > | Reorder the C++ compiler discovery stages. Check first the compiler vendor > | before checking if we are able to compile the test program. This is requir

[OMPI devel] LANL ORTE todo / milestones

2006-08-24 Thread Brian Barrett
Hi all - LANL had an internal meeting yesterday trying to classify a number of issues we're having with the run-time environment for Open MPI and how to best prioritize team resources. We thought it would be good to both share the list (with priorities) with the group and to ask the group if ther

Re: [OMPI devel] OpenRTE and Threads

2006-08-25 Thread Brian Barrett
In general, I think making the Public interface to OpenRTE not thread safe is a reasonable thing to do. However, I have some concern over how this would work with the event library. When the project is compiled with progress threads, the event library runs in its own thread. More important to th

[OMPI devel] Stack trace printing

2006-08-30 Thread Brian Barrett
Hi all- A question about stack tracing. Currently, we have it setup so that, say, a segfault results in: [0]func:/u/jjhursey/local/odin/ompi/devel/lib/libopal.so.0(opal_backtrace_print+0x2b) [0x2a959166ab] [1] func:/u/jjhursey/local/odin/ompi/devel/lib/libopal.so.0 [0x2a959150bb] [2] func:/lib6

Re: [OMPI devel] Stack trace printing

2006-08-30 Thread Brian Barrett
Yes. It's always the trampoline, the signal handler, and the stack trace printer. Brian On Wed, 2006-08-30 at 17:37 -0400, Jeff Squyres wrote: > As long as it's always 3 function calls -- do we know that it will be? > > > On 8/30/06 5:32 PM, "Brian Barrett"

Re: [OMPI devel] Buffer Overflow Error

2006-08-31 Thread Brian Barrett
What facilities are you using to detect the buffer overflow? We've seen no such issues in our testing and I'd be surprised if there was an issue in that code path. Valgrind and friends don't show any issues on our test machines, so without more detail, I'm afraid we really can't fix the issue you

Re: [OMPI devel] include file locations

2006-09-05 Thread Brian Barrett
On Tue, 2006-09-05 at 12:07 -0700, Ben Byer wrote: > Hi all! I'm happy to report that I was able to build OpenMPI 1.1 4- > way fat (ppc, i386, ppc64, x86_64) using buildpackage.sh. > > When I installed the resulting package, it installed the following > include files: > > /usr/include/constan

Re: [OMPI devel] portability problem in ompi_info

2006-09-17 Thread Brian Barrett
I ran into a situation (I don't remember the exact details, unfortunately), where the C compiler supports asprintf() but the C++ compiler doesn't. I believe this came up when I was compiling with gcc (C) and xlC (C++). But it might have been another set of compilers -- I unfortunately don

Re: [OMPI devel] Buffer Overflow Error

2006-09-25 Thread Brian Barrett
ll no longer occur. Brian On Thu, 2006-08-31 at 15:56 -0600, Brian Barrett wrote: > What facilities are you using to detect the buffer overflow? We've seen > no such issues in our testing and I'd be surprised if there was an issue > in that code path. Valgrind and friends don&

Re: [OMPI devel] mixing stdio and write?

2006-10-13 Thread Brian Barrett
Because I'm silly. I shall make it so - Thanks! Brian On Oct 13, 2006, at 5:44 AM, Ralf Wildenhues wrote: Hello Brian, all, | r12094 | brbarret | 2006-10-11 20:40:21 +0200 (Wed, 11 Oct 2006) | 11 lines | Changed paths: |M /trunk/opal/util/output.c | | Use write() instead of fprintf()

[OMPI devel] configure changes (ooops!)

2006-10-13 Thread Brian Barrett
Hi all - At the last minute last night I wanted to change one small detail in the wrapper compiler code. Then, as is typical with me, I got distracted. As some of you noticed, none of the configure changes made it into the trunk last night. Should happen this weekend. Sorry about that

Re: [OMPI devel] IPv6 in btl/tcp

2006-10-16 Thread Brian Barrett
Adrian - I just committed some code in the TCP OOB component to deal with packing / unpacking sockaddr_in structures for cases where there is different heterogeneity / padding. I think it's going to require some work to make it IPv6 friendly. Just an FYI. Brian On Oct 16, 2006, at 5:0

[OMPI devel] (no subject)

2006-10-18 Thread Brian Barrett
per data files to piece together to activate the multi-lib support in the wrapper compilers. Comments? Brian -- Brian Barrett Open MPI developer http://www.open-mpi.org/

Re: [OMPI devel] build problem with 1.1.4

2007-02-15 Thread Brian Barrett
On Feb 15, 2007, at 3:07 AM, Bert Wesarg wrote: I encounter a build problem with openmpi 1.1.4, which don't show up with version 1.1.2. After a simple ./configure, the variable OPAL_DATADIR in opal/include/opal/install_dirs.h shows this: $ grep '^#define OPAL_DATADIR' openmpi-1.1.2/opal/incl

Re: [OMPI devel] installed wrappers

2007-02-15 Thread Brian Barrett
On Feb 15, 2007, at 2:54 AM, Bert Wesarg wrote: why are the mpiCC, mpif77, and mpif90 wrappers installed, when i specify --disable-mpi-cxx, --disable-mpi-f77, and --disable-mpi-f90 for the ./configure? The Fortran 77 and Fortran 90 compilers will be disabled and return an error if those la

Re: [OMPI devel] [PATCH] ompi_get_libtool_linker_flags.m4: fix $extra_ldflags detection

2007-02-26 Thread Brian Barrett
Very true, thanks. I'll fix this evening. Brian On Feb 25, 2007, at 4:51 AM, Bert Wesarg wrote: Hallo, ok the sed should be even more portable. but the problem with a CC like "gcc -m32" isn't solved, so you should add this line and use the $tmpCC in the sed expression, to get "gcc -m32

Re: [OMPI devel] comment on wiki/PrintfCodes

2007-02-26 Thread Brian Barrett
On Feb 26, 2007, at 1:54 PM, Bert Wesarg wrote: I can only speak for a 3 year old linux system but I read evenly the wiki page https://svn.open-mpi.org/trac/ompi/wiki/PrintfCodes and I wonder if someone tried this code. On my system the PRId32 is defined as "d" for example. so to use this yo

Re: [OMPI devel] [PATCH] ompi_get_libtool_linker_flags.m4: fix $extra_ldflags detection

2007-03-19 Thread Brian Barrett
. Than you. Bert Wesarg Brian Barrett wrote: Very true, thanks. I'll fix this evening. Brian On Feb 25, 2007, at 4:51 AM, Bert Wesarg wrote: Hallo, ok the sed should be even more portable. but the problem with a CC like "gcc -m32" isn't solved, so you should add this lin

Re: [OMPI devel] Is it possible to get BTL transport work directly with MPI level

2007-04-04 Thread Brian Barrett
On Apr 2, 2007, at 10:23 AM, Jeff Squyres wrote: On Apr 1, 2007, at 3:12 PM, Ralph Castain wrote: I can't help you with the BTL question. On the others: 2. Go through the BML instead -- the BTL Management Layer. This is essentially a multiplexor for all the BTLs that have been instantiated.

Re: [OMPI devel] [Fwd: Re: [CIC600000217180] Still having strange MPI errors on coyote...]

2007-04-12 Thread Brian Barrett
Well, that eliminates the easy ones. MPI_Cartdim_get isn't one of the more popular functions, so it's probably a bug in there. Would it be possible to get access to the code? Thanks, Brian On Apr 11, 2007, at 4:20 PM, Paul Weber wrote: David, Here's some more info. Looks like he is u

Re: [OMPI devel] SOS!! Run-time error

2007-04-16 Thread Brian Barrett
Wow, it appears everything aborts when opal_event_loop() is called. Did you make any changes to the event library code in opal/event/? If not, that might indicate a mismatch between the binaries and libraries (ie, binaries from one build vs. libraries from another). This will cause rando

Re: [OMPI devel] Fancy ORTE/MPIRUN bugs

2007-04-20 Thread Brian Barrett
On Apr 19, 2007, at 8:38 AM, Aurelien Bouteiller wrote: Hi, I am experiencing several fancy bugs with ORTE. All bugs occur on Intel 32 bits architecture under Mac OS X using gcc 4.2. The tested version is todays trunk (it also have occured for at least three weeks) First occurs when compiling

[OMPI devel] Autotools Upgrade Time

2007-05-08 Thread Brian Barrett
Hi all - As was discussed on the telecon a couple of weeks ago, to try to lower the maintenance cost of the build system, starting this Saturday Autoconf 2.60 and Automake 1.10 will be required to successfully run autogen.sh on the trunk. As I mentioned in a previous e-mail, the required

[OMPI devel] Nightly trunk tarball AC/AM change

2007-05-09 Thread Brian Barrett
Hi all - After a minor hiccup last night, nightly tarballs for the trunk (and eventually v1.3 branch) are now made with AC 2.61, AM 1.10, and LT 2.1a. Don't forget the mandatory update of AC and AM for the trunk coming saturday morning! Brian

Re: [OMPI devel] Autotools Upgrade Time

2007-05-14 Thread Brian Barrett
On May 8, 2007, at 2:03 PM, Brian Barrett wrote: As was discussed on the telecon a couple of weeks ago, to try to lower the maintenance cost of the build system, starting this Saturday Autoconf 2.60 and Automake 1.10 will be required to successfully run autogen.sh on the trunk. As I

Re: [OMPI devel] [RFC] Send data from the end of a buffer during pipeline proto

2007-05-17 Thread Brian Barrett
On the other hand, since the MPI standard explicitly says you're not allowed to call fork() or system() during the MPI application and sense the network should really cope with this in some way, if it further complicates the code *at all*, I'm strongly against it. Especially since it won't

Re: [OMPI devel] undefined environ symbol on Darwin

2007-05-28 Thread Brian Barrett
On May 28, 2007, at 10:59 AM, Jack Howarth wrote: On MacOS X, the current v1.1.5 and v1.2.2 sources for openmpi create shared libraries with undefined environ symbols. This problem on MacOS X and the available workarounds are discussed on the fink wiki section on Porting Notes... I understa

Re: [OMPI devel] undefined environ symbol on Darwin

2007-05-28 Thread Brian Barrett
On May 28, 2007, at 4:57 PM, Jack Howarth wrote: I have been told that Paraview is one package that exhibits this problem with undefined environ symbols. This will occur in any package which creates its own shared libraries that link in any openmpi shared library that contains the undefined e

Re: [OMPI devel] undefined environ symbol on Darwin

2007-05-29 Thread Brian Barrett
On May 29, 2007, at 7:35 AM, Jack Howarth wrote: and if you see environ undefined, identify which library it is in and which object file it came from. I would also note that my patch reveals that several instances of the environ variable being declared that are missing the Windows wrappers. So i

Re: [OMPI devel] [OMPI svn] svn:open-mpi r14897

2007-06-06 Thread Brian Barrett
Yup, thanks. Brian On Jun 6, 2007, at 2:27 AM, Bert Wesarg wrote: +#ifdef HAVE_REGEXEC +args_count = opal_argv_count(options_data[i].compiler_args); +for (j = 0 ; j < args_count ; ++j) { +if (0 != regcomp(&res, options_data[i].compiler_args [j], REG_NOSUB)) { +

Re: [OMPI devel] [OMPI svn] svn:open-mpi r14768

2007-06-07 Thread Brian Barrett
I'm available this afternoon... Brian On Jun 7, 2007, at 12:39 PM, George Bosilca wrote: I'm available this afternoon. george. On Jun 7, 2007, at 2:35 PM, Galen Shipman wrote: Are people available today to discuss this over the phone? - Galen On Jun 7, 2007, at 11:28 AM, Gleb Natapo

Re: [OMPI devel] threaded builds

2007-06-11 Thread Brian Barrett
Yes, this is a known issue. I don't know -- are we trying to make threads work on the 1.2 branch, or just the trunk? I had thought just the trunk? Brian On Jun 11, 2007, at 8:13 AM, Tim Prins wrote: I had similar problems on the trunk, which was fixed by Brian with r14877. Perhaps 1.

Re: [OMPI devel] Patch to fix cross-compile failure

2007-06-11 Thread Brian Barrett
Argonne used AC_TRY_RUN instead of AC_TRY_COMPILE (I believe) because there are some places where aio functions behaved badly (returned ENOTIMPL or something). I was going to make it call AC_TRY_RUN if we weren't cross-compiling and AC_TRY_COMPILE if we were. I'll commit something this ev

Re: [OMPI devel] MPI_REAL2 support and Fortran ddt numbering

2007-06-19 Thread Brian Barrett
On Jun 19, 2007, at 8:35 AM, Terry D. Dontje wrote: Rainer Keller wrote: Hello dear all, with the current numbering in mpif-common.h, the optional ddt MPI_REAL2 will break the binary compatibility of the fortran interface from v1.2 to v1.3 (see r15133). Now apart from MPI_REAL2 being of let's

[OMPI devel] forcing a component to build static

2007-06-20 Thread Brian Barrett
Following up on the telecon conversation about automatically forcing components to build statically (ie, part of libmpi and friends instead of a stand-alone dso), here's an example of how to do so: AC_DEFUN([MCA_backtrace_darwin_COMPILE_MODE], [ AC_MSG_CHECKING([for MCA component $2:$3 c

Re: [OMPI devel] Modex

2007-06-26 Thread Brian Barrett
On Jun 26, 2007, at 6:08 PM, Tim Prins wrote: Some time ago you were working on moving the modex out of the pml and cleaning it up a bit. Is this work still ongoing? The reason I ask is that I am currently working on integrating the RSL, and would rather build on the new code rather than th

Re: [OMPI devel] Modex

2007-06-27 Thread Brian Barrett
ng as long as we can have some sort of documenation describing what changed like which old functions are replaced with newer functions and any description of changed assumptions. --td Brian Barrett wrote: On Jun 26, 2007, at 6:08 PM, Tim Prins wrote: Some time ago you were working on movin

Re: [OMPI devel] One-sided operations with Portals

2007-07-05 Thread Brian Barrett
On Jul 5, 2007, at 4:16 PM, Glendenning, Lisa wrote: Ron Brightwell at SNL has asked me to look into optimizing Open MPI's one-sided operations over Portals. Does anyone have any guidance or thoughts for this? Hi Lisa - There are currently two implementations of the one-sided interface for

[OMPI devel] fake rdma flag again?

2007-07-09 Thread Brian Barrett
Hi all - I've finally committed a version of the rdma one-sided component that 1) works and 2) in certain situations actually does rdma. I'll make it the default when the BTLs are used as soon as one last bug is fixed in the DDT engine. However, there is still one outstanding issue. Som

Re: [OMPI devel] Multi-environment builds

2007-07-10 Thread Brian Barrett
On Jul 10, 2007, at 7:09 AM, Tim Prins wrote: Jeff Squyres wrote: 2. The "--enable-mca-no-build" option takes a comma-delimited list of components that will then not be built. Granted, this option isn't exactly intuitive, but it was the best that we could think of at the time to present a gene

Re: [OMPI devel] Notes on building and running Open MPI on Red Storm

2007-07-12 Thread Brian Barrett
Do you have a Subversion account? If so, feel free to update the wiki ;). If not, we should probably get you an account. Then feel free to update the wiki ;). But thanks for the notes! Brian On Jul 11, 2007, at 4:47 PM, Glendenning, Lisa wrote: Some supplementary information to the wik

Re: [OMPI devel] Notes on building and running Open MPI on Red Storm

2007-07-12 Thread Brian Barrett
On Jul 11, 2007, at 4:47 PM, Glendenning, Lisa wrote: * When linking with libopen-pal, the following warning is normal: 'In function `checkpoint_response': warning: mkfifo is not implemented and will always fail' Josh - I thought the checkpoint code wasn't built unless requested. Anyway,

Re: [OMPI devel] Build failures of 1.2.3 on Debian hppa, mips, mipsel, s390, m68k

2007-07-14 Thread Brian Barrett
On Jul 14, 2007, at 8:26 AM, Dirk Eddelbuettel wrote: Please let us (ie Debian's openmpi maintainers) how else we can help. I am ccing the porters lists (for hppa, m68k, mips) too to invite them to help. I hope that doesn't get the spam filters going... I may contact the 'arm' porters onc

Re: [OMPI devel] Build failures of 1.2.3 on Debian hppa, mips, mipsel, s390, m68k

2007-07-14 Thread Brian Barrett
On Jul 14, 2007, at 10:53 AM, Dirk Eddelbuettel wrote: Methinks we need to fill in a few blanks here, or make do with non-asm solutions. I don't know the problem space that well (being a maintainer rather than upstream developer) and am looking for guidance. Either way is an option. There

Re: [OMPI devel] Build failures of 1.2.3 on Debian hppa, mips, mipsel, s390, m68k

2007-07-14 Thread Brian Barrett
On Jul 14, 2007, at 11:16 AM, George Bosilca wrote: Instead of failing at configure time, we might want to disable the threading features and the shared memory device if we detect that we don't have support for atomics on a specified platform. In a non threaded build, the shared memory device is

Re: [OMPI devel] Build failures of 1.2.3 on Debian hppa, mips, mipsel, s390, m68k

2007-07-14 Thread Brian Barrett
On Jul 14, 2007, at 11:51 AM, Gleb Natapov wrote: On Sat, Jul 14, 2007 at 01:16:42PM -0400, George Bosilca wrote: Instead of failing at configure time, we might want to disable the threading features and the shared memory device if we detect that we don't have support for atomics on a specified

Re: [OMPI devel] Build failures of 1.2.3 on Debian hppa, mips, mipsel, s390, m68k

2007-07-14 Thread Brian Barrett
penib (completely or partially?) Anybody knows about any other components with atomic requirements ? george. On Jul 14, 2007, at 1:59 PM, Brian Barrett wrote: On Jul 14, 2007, at 11:51 AM, Gleb Natapov wrote: On Sat, Jul 14, 2007 at 01:16:42PM -0400, George Bosilca wrote: Instead of faili

[OMPI devel] RML/OOB change heads up

2007-07-16 Thread Brian Barrett
Hey all - Thought I would give you guys a heads up on some code that will be coming into the trunk in the not too distant future (hopefully tomorrow?). The changes revolve around the RML/OOB interface and include: * General TCP cleanup for OPAL / ORTE * Simplifying the OOB by moving

Re: [OMPI devel] [OMPI svn] svn:open-mpi r15492

2007-07-19 Thread Brian Barrett
Sigh. Thanks. Should probably have tested that code ;). And the solaris code. and the windows code. Brian On Jul 19, 2007, at 7:37 AM, Jeff Squyres wrote: Thanks! Ralph got it this morning in https://svn.open-mpi.org/trac/ompi/ changeset/15501. On Jul 19, 2007, at 5:34 AM, Bert Wesarg

Re: [OMPI devel] Fwd: [Open MPI] #1101: MPI_ALLOC_MEM with 0 size must be valid

2007-07-24 Thread Brian Barrett
On Jul 24, 2007, at 8:28 AM, Gleb Natapov wrote: On Tue, Jul 24, 2007 at 11:20:11AM -0300, Lisandro Dalcin wrote: On 7/23/07, Jeff Squyres wrote: Does anyone have any opinions on this? If not, I'll go implement option #1. Sorry, Jeff... just reading this. I think your option #1 is the bett

Re: [OMPI devel] [RFC] Sparse group implementation

2007-07-25 Thread Brian Barrett
I have an even bigger objection than Rich. It's near impossible to measure the latency impact of something like this, but it does have an additive effect. It doesn't make sense to have all that code in the critical path for systems where it's not needed. We should leave the compile time

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