the problem.
-John
On Mon, Oct 27, 2014 at 4:31 AM, Elizabeth Chia elc...@gmail.com wrote:
Dear all
Usually the alignment statistics from bowtie2 will be printed to the
stderr
file, however, on the local instance, the stderr file is empty after
alignment. It still does the alignment
Hi there
1. Why is it that even after installing cufflinks 2.1.1 from the toolshed,
it doesn't get reflected when I clicked on the tool from the side panel? It
still shows 0.0.5 and 0.0.7. Think it's the same with others too (eg:
bowtie)
2. I've modified the bowtie_indices.loc file under
Dear all
Usually the alignment statistics from bowtie2 will be printed to the stderr
file, however, on the local instance, the stderr file is empty after
alignment. It still does the alignment, but the statistics are not printed
out.
This is my hg summary:
parent: 13802:f7dd0060c296
On Sat, Oct 18, 2014 at 8:52 PM, Björn Grüning bjoern.gruen...@gmail.com
wrote:
Hi Elizabeth,
can you please let us know which parameters you have used?
Thanks,
Bjoern
Am 18.10.2014 um 14:33 schrieb Elizabeth Chia:
Hi there
I'm running into this error with cuffdiff
`upload1` jobs with a local job
runner instead of on the cluster - frequently login servers and web
servers have more external access than compute nodes in cluster
environments. Let me know if you need help configuring that.
-John
On Wed, Oct 1, 2014 at 3:41 AM, Elizabeth Chia elc...@gmail.com
Dear *
I have a local galaxy instance installed on a cluster.
I've been trying to upload data by URL but kept getting this error: *unable
to fetch url of data [Errno socket error] [Errno 110] connection timed
out. *I've tried with and without file compression format and still gives
me that
