Re: [HCP-Users] ROI parcellation

2015-12-17 Thread Harms, Michael
lt;hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] ROI parcellation Hi Michael and all, My goal is to use the aparc+aseg (in MNI from the standard Structural package 100307/MNINonLinear/aparc+aseg.nii.gz)as a parcellation for the volumetric 4D FIX extended clean data tha

Re: [HCP-Users] ROI parcellation

2015-12-17 Thread Joelle Zimmermann
ally > derived from a subset of HCP participants is in the works (from Matt G.) > cheers, > -MH > -- > Michael Harms, Ph.D. > --- > Conte Center for the Neuroscience of Mental Disorders > Washington University School of Medicine &

Re: [HCP-Users] ROI parcellation

2015-12-16 Thread Joelle Zimmermann
uesday, December 15, 2015 at 3:51 PM > To: 'Joelle Zimmermann' , "Harms, Michael" > > Cc: 'Greg Burgess' , "hcp-users@humanconnectome.org" > > > Subject: Re: [HCP-Users] ROI parcellation > > We have not distributed the Gordon et

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Glasser, Matthew
ailto:joelle.t.zimmerm...@gmail.com>>, "Harms, Michael" mailto:mha...@wustl.edu>> Cc: 'Greg Burgess' mailto:gcburg...@gmail.com>>, "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>>

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Jennifer Elam
Zimmermann Sent: Tuesday, December 15, 2015 2:42 PM To: Harms, Michael Cc: Greg Burgess; hcp-users@humanconnectome.org Subject: Re: [HCP-Users] ROI parcellation Thank you Michael, I found those aparc+asegs there. Is the Gordon et al. parcellation available in the package? Greg, I'm

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Joelle Zimmermann
rms, Ph.D. > --- > Conte Center for the Neuroscience of Mental Disorders > Washington University School of Medicine > Department of Psychiatry, Box 8134 > 660 South Euclid Ave. Tel: 314-747-6173 > St. Louis, MO 63110 Email:

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Harms, Michael
te: Tuesday, December 15, 2015 9:35 AM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] ROI parcellation Hi everyone, Does HCP have a specific ROI parcellation that is commonly used/recommended? I  would prefer to begin with anatomically (rather than

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Joelle Zimmermann
ha...@wustl.edu > > From: Joelle Zimmermann > Date: Tuesday, December 15, 2015 9:35 AM > To: "hcp-users@humanconnectome.org" > Subject: [HCP-Users] ROI parcellation > > Hi everyone, > > Does HCP have a specific ROI parcellation that is commonly > used/rec

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Greg Burgess
ton University School of Medicine > Department of Psychiatry, Box 8134 > 660 South Euclid Ave. Tel: 314-747-6173 > St. Louis, MO 63110 Email: mha...@wustl.edu > > From: Joelle Zimmermann > Date: Tuesday, December 15, 2015 9:35 AM > To: "hcp-users@humanconnectome.org&

Re: [HCP-Users] ROI parcellation

2015-12-15 Thread Harms, Michael
t;hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] ROI parcellation Hi everyone, Does HCP have a specific ROI parcellation that is commonly used/recommended? I  would prefer to begin with anatomically (rather than functionally defined) ROIs. My goal is to par

[HCP-Users] ROI parcellation

2015-12-15 Thread Joelle Zimmermann
Hi everyone, Does HCP have a specific ROI parcellation that is commonly used/recommended? I would prefer to begin with anatomically (rather than functionally defined) ROIs. My goal is to parcellate the voxel-wise time series into larger ROIs. I've previously used the Desikan-Killiany atlas, but