[MORPHMET] convert 2D landmarked photos to a 3D configuration?

around those issues. Does anyone know if this is possible, and if so, how? Thanks for any help! Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr

[MORPHMET] converting 2D landmarked photos to 3D configuration?

shape. I was hoping that by stitching them into a 3D object, I could deal with slight differences in alignment of the specimens in the photos. Thanks for any advice, Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from this group and stop

Re: [MORPHMET] convert 2D landmarked photos to a 3D configuration?

Christy, There is a package for R called 'stereomorph', it gives you the tools to acquire 3D landmark data from the use of 2 camera-setup. Here I give you some useful links, one the the authors page and the other one is the paper where it was published. home.uchicago.edu/~aolsen/software

[MORPHMET] 2 PhD positions on CT scanning and ecomorphology of Australian Lizards

Council Linkage Project Grant (mid-2018 to mid-2021) and involve collaborations with Museum Victoria (Dr Jane Melville, Dr Joanna Sumner, Dr Katie Smith-Date), the South Australian Museum (Dr Mark Hutchinson), Dr Christy Hipsley (University of Melbourne), Dr Johannes Müller (Museum für Naturkunde

[MORPHMET] Re: Human Skull Evolution Video?

Hi Abby, The Landmark Editor webpage has lots of resources on that topic, including a powerpoint presentation and video. See here -> http://www.idav.ucdavis.edu/research/EvoMorph Christy On Tuesday, November 20, 2018 at 10:53:14 AM UTC+11, abbygracedrake wrote: > > Hello! > >

[MORPHMET] Re: testing for convergence in 3D shape space

Thanks everyone! On Thursday, January 28, 2016 at 1:39:43 AM UTC+11, Christy Hipsley wrote: > > Dear All, > > I'm working with a 3D GM data set and am looking for a specific test of > convergence that also accounts for phylogeny. After some searching it's > still no

[MORPHMET] comparing ontogenetic trajectories in a phylogenetic framework

be appreciated! Christy School of BioSciences University of Melbourne Parkville VIC 3010, Australia Email: chips...@unimelb.edu.au Museum Victoria GPO Box 666 Melbourne VIC 3001, Australia

[MORPHMET] testing for convergence in 3D shape space

phylogenetic signal and I suspect that one ecological group in particular is highly convergent. Thanks for any help! Christy School of BioSciences University of Melbourne Parkville VIC 3010, Australia Email: chips...@unimelb.edu.au -- MORPHMET may be accessed via its webpage at http

[MORPHMET] MeshLab - setting default FOV as Ortho?

of other colleagues but no happy solution so far - I'm hoping someone here might have the magic answer! Thanks, Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET&q

[MORPHMET] Re: allometry and phylogeny

re with tip taxa? Thanks for any advice, Christy On Friday, July 1, 2016 at 12:31:37 AM UTC+10, dcadams wrote: > > Damien, > > > > Yes, one can take the regression parameters for each species and use these > as ‘tips’ data to obtain ancestral estimates of the regression slop

[MORPHMET] the problem with CVA... or is it?

d Geomorph for analyses. Best, Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, send a

[MORPHMET] Re: procD.allometry with group inclusion

to then determine which groups differed in y-intercept, would one set up the advanced.procD.lm model like this and compare the pairwise LS means? advanced.procD.lm(Y ~ size, ~ size+group, groups = ~group, slope = NULL, iter=1) Thanks if you can confirm that I'm setting this up correctly, Christy

[MORPHMET] fitting lines to allometric plots?

only used for visual comparison, is that technically okay? Thanks for any feedback, Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from

[MORPHMET] creating mirror reflection of one-side landmarks

if there is an easy way to do this. I naively tried multiplying the x coordinate dimensions *-1 and keeping y the same, but since the midplane x coordinates are not at 0 this obviously doesn't work. Any advice or code would be greatly appreciated! Thanks, Christy -- MORPHMET may be accessed via its webpage

[MORPHMET] modularity tests - effect of negative value in correlation matrix?

can use to compare modularity hypotheses? In Goswami & Finarelli, they show that reducing the dataset down to 10 individuals from 48 still performs very well, but is there a true minimum? For example could I take the 3 largest individuals from each species for the test? Thanks for any advi

[MORPHMET] new article out on digital morphology data openness based on Morphmet survey

, not technology, is our biggest challenge to open digital morphology data*', available here -> https://www.nature.com/articles/s41597-019-0047-0. We thank everyone again who participated, and many others who have engaged in similar conversations over the years. Best, Christy + Emma -- MORPHMET

[MORPHMET] papers with 1000+ 3D models?

Hi all, I'm looking for GM or other similar papers that include high numbers of 3D models, like several hundreds or over a thousand. Particularly if these were generated using microCT. Thank you for any help, Christy -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org

[MORPHMET] Digital morphology data survey: ethics on data generation & use

, Christy Hipsley & Emma Sherratt -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it,

[MORPHMET] Digital morphology data survey results

"*. <https://lh3.googleusercontent.com/-LPnca12rjzg/WY1FjymbH4I/AAM/GbaUK7LLEDoOAWo76-ubOQ01aalNwVdJgCLcBGAs/s1600/Wordcloud.jpg> We will continue to post our findings here and again we thank everyone for their time and feedback. Best wishes, Christy & Emma Dear Morphmet Commu