such file into future MZmine
> versions (2.13 or later).
>
> Best regards,
>
> Tomas
>
>
>
> On Dec 5, 2014, at 19:28, YS LING wrote:
>
> Dear Mzmine developer,
>
> I encountered the problem as above. I acquired the data using Agilent QqQ
> with the m
Dear Mzmine developer,
I encountered the problem as above. I acquired the data using Agilent QqQ
with the mode Precursor Ion scan. I convert the data into mzXML but MZmine
2.12 gave me the task error as above. Could you please give me some advice
on it?
The data is quite huge and here is the link
G'day Chris,
Sorry for late reply as i dig this mail from the junk mail box (for some
reason it went there).
Yes, I had installed the R as you told me and i had set all the parameters.
Yet the baseline correction still has the problem when i tried to run
baseline correction, the MZmine window just
Hi Tomas:
My MZmine steps as following
Raw data imput
Filtering- Scan by scan filtering- Resampling filter-m/zbin length 2ppm
Peak detection- mass detection- centroid= noise 1.0 E4, MS level 1
Chromatogram builder-mass list 1= min time span 0.1, min height 1.0E4,
mass tolerance- 3ppm
P/S i had se
; where R is installed.
>
> Tomas
>
> On Apr 17, 2012, at 11:50 AM, YS LING wrote:
>
> I'm not quite sure what u mean by JRI_LIB_PATH variable in the script is
> set correctly. Yes i had installed the R 2.15.0. But the problem still
> remain.
>
> Tomas Pluskal
artMZmine.bat script and check if the JRI_LIB_PATH
> variable in the script is set correctly.
>
> Tomas
>
>
> On Apr 17, 2012, at 10:38 AM, YS LING wrote:
>
> > Hi Tomas,
> >
> > After i imported the RAW data, I underwent Filtering > Baseline
> correc
; Sorry I do not understand what do you mean by "automatic shutting down".
> Please describe the exact steps you have taken.
>
> Cheers,
>
> Tomas
>
>
>
> On Apr 17, 2012, at 9:53 AM, YS LING wrote:
>
> Hi Tomas,
> I wonder if you have encounter the p
Tomas,
Sorry for wrongly typing your name. Really apologize for that.
YS LING 於 2012年3月7日下午6:50 寫道：
> Hi Thomas,
> Since i'm a new user of MZmine. I can't really catch what do you mean by
> peak detection algorithms that MZmine are not going to work? Is there any
>
data - I think the peak detection algorithms that we use are not going
> to work..
>
> Best regards,
>
> Tomas
>
>
> On Mar 7, 2012, at 10:13 AM, YS LING wrote:
>
> Thomas,
> I had sent to the https://www.yousendit.com/download/
> M3BsTXRVdVUwVW1LRmNUQw<
Mar 6, 2012, at 11:47 PM, YS LING wrote:
>
> Hi Thomas,
> The TIC file is quite huge, about 22MB (13mb when zipped). Is there any
> other way i can send it to you as gmail reported that your e-mail had
> rejected my attached file.
> Thanks a lot.
>
> Tomas Pluskal 於 2012年3月6日下午
arent ion Scan" file. If you can
> provide some files to test and write some description of this data, I can
> add the support to MZmine.
>
> Best regards,
>
> Tomas
>
>
> On Mar 4, 2012, at 4:58 PM, YS LING wrote:
>
> Hi MZmine Development Team,
>
> I j
Task error: java.io.IOexpection: Unexpected format: SCAN FILTER: +c ESI
Full pr 184.000 [300-1000] (XcalibourRawFileReadTask.java:218)
[image: 內置圖片 1]
Is this a bug or MZmine simply can't open the RAW data which obtained via
Parent ion Scan? Please do assist me with this problem. Thanks a l
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