Hi Tomas,
I did not use Savitzky-Golay algorithm.
Cheers,
Gözde
M. Sc, PhD-student
Gözde Gürdeniz,
Group of Preventive Nutrition,
Department of Human Nutrition,
University of Copenhagen,
Rolighedsvej 30, DK-1958 Frederiksberg
Copenhagen-Denmark
E-mail: [email protected]
Cell Phone: (+4
Hi Gozde,
Did you use the Savitzky-Golay deconvolution algorithm to produce your peak
list?
The strange 2D plot could be caused by additional zero m/z data points inserted
due to a bug in the Savitzky-Golay algorithm (see one of the previous messages
in the mailing list).
I have now fixed the b
Hi Tomas
Sorry for late reply.
I didn*t use the old project. It is kind of strange that we are the only
ones that are experiencing this problem.
We have installed MZmine in different computers and it is always the
same problem.
I know it doesn*t make so much sense but I am still thinking that i
Hi Gözde,
Did you perform peak detection again using MZmine 2.3, or did you just open
your old project?
If you just opened your old project, the problem may still be there, because
the old data will include the additional zero data point, as I explained in my
last email.
Try running peak detect
Hi,
Regarding to my question about 2D plot (mail I sent: 2011-05-13). I have
installed MZmine 2.3. In 2D plot the lines (detected peaks) are still
connected with X-axis.
The problem appears when I click on *Set automatically* in the *2D
visualizer set parameters* window. I guess it should be rel
Hi Gözde,
Yes you are right, that looks strange. Can you send a sample file and exact
parameters you used for peak detection? I will take a look at it.
Tomas
On May 13, 2011, at 5:03 PM, Gözde Gürdeniz wrote:
> Hello
>
> After applying peak detection and deconvolution in MZmine 2.2, I am tr
