Re: [Mzmine-devel] problem with mzmine

Dear Shana It seems like you have the 32-bit version of Java installed. Please uninstall all Java versions on your computer and then install the latest 64-bit version from here: https://java.com/en/download/manual.jsp Afterwards, you should be able to set the heap size to larger values which s

Re: [Mzmine-devel] problem with Mzmine

Hi Federico, > > DearMzmine developers > > My name is Federico Padilla, and I am a masters’ student at university of Sao > Paulo, Brazil. Right now in our research team (AsterBioChem - > http://www.asterbiochem.org/) we are working in the field of Metabolomics > (using a UHPLC-UV-MS Orbitrap,

Re: [Mzmine-devel] Problem with MZmine.

Tomas, Sorry for wrongly typing your name. Really apologize for that. YS LING 於 2012年3月7日下午6:50 寫道： > Hi Thomas, > Since i'm a new user of MZmine. I can't really catch what do you mean by > peak detection algorithms that MZmine are not going to work? Is there any > reason for that? Is it related

Re: [Mzmine-devel] Problem with MZmine.

Hi Thomas, Since i'm a new user of MZmine. I can't really catch what do you mean by peak detection algorithms that MZmine are not going to work? Is there any reason for that? Is it related with the data format error or the peak separation problem? Thanks Tomas Pluskal 於 2012年3月7日下午2:17 寫道： > Hi

Re: [Mzmine-devel] Problem with MZmine.

Hi Yee-Soon, OK I added support for this kind of file to MZmine. It will simply treat the 'pr' scans as regular MS level 1 scans. This will be included in MZmine 2.7. However, I am not sure what kind of processing you are planning with this data - I think the peak detection algorithms that we u

Re: [Mzmine-devel] Problem with MZmine.

Thomas, I had sent to the https://www.yousendit.com/download/ M3BsTXRVdVUwVW1LRmNUQw. please do check it up. Regarding that RAW data, I scan the biological lipids, phosphatidyl choline (PC) under Parent ion scan mode m/z 184 (its common fra

Re: [Mzmine-devel] Problem with MZmine.

Please use DropBox / RapidShare / Skydrive etc. http://www.google.com/?q=send+large+file Tomas On Mar 6, 2012, at 11:47 PM, YS LING wrote: Hi Thomas, The TIC file is quite huge, about 22MB (13mb when zipped). Is there any other way i can send it to you as gmail reported that your e-mail had re

Re: [Mzmine-devel] Problem with MZmine.

Hi Thomas, The TIC file is quite huge, about 22MB (13mb when zipped). Is there any other way i can send it to you as gmail reported that your e-mail had rejected my attached file. Thanks a lot. Tomas Pluskal 於 2012年3月6日下午12:26 寫道： > Hi Ys, > > So far I have never encountered "Parent ion Scan"

Re: [Mzmine-devel] Problem with MZmine.

Hi Ys, So far I have never encountered "Parent ion Scan" file. If you can provide some files to test and write some description of this data, I can add the support to MZmine. Best regards, Tomas On Mar 4, 2012, at 4:58 PM, YS LING wrote: Hi MZmine Development Team, I just download the MZmi