[spctools-discuss] Re: Unresolved issue: TPP GUI error message: sh: tpp_hostname: command not found

2010-05-20 Thread Eliza
The webserver is working fine, it is used to host a couple other sites and they aren't experiencing any issues :-) I ran check_env.pl but I am not sure what I should which values I should be verifying, can you provide any advice here? On May 19, 12:01 am, Vishal Swaroop vishal@gmail.com

Re: [spctools-discuss] Re: Unresolved issue: TPP GUI error message: sh: tpp_hostname: command not found

2010-05-20 Thread Vishal Swaroop
As I have not configured TPP on linux so I am not sure if I will be of help but check WEBSERVER_ROOT and SCRIPT_FILENAME = path to tppbin/ check_env.pl See, if path to tppbin in SCRIPT_FILENAME is set in apache configuration file httpd.conf. As per your post description, does it mean that

Re: [spctools-discuss] Re: Installing X! Tandem Under Linux

2010-05-20 Thread Gradjanin Grada
Hello, I have problem running a search on X!tanden under Win7. Raw files were generated by Waters qToF, I have used masswolf to convert into mzxml. This is just a simple system test with cytochrome c and BSA, and I am using the default parameters as set during the installation. Apache is running

[spctools-discuss] Re: Compatibility with Mascot server 2.3

2010-05-20 Thread Marco Falda
Ok, thank you. So I think that if it works on Windows there should not be problems in Linux; I will try. Marco On 18 Mag, 18:59, Fil filippo.genov...@email.it wrote: No problems here on Win7, but I didn't try with Linux. Hope it helps, Best Filippo On 18 Mag, 12:26, Marco Falda

Re: [spctools-discuss] Re: Installing X! Tandem Under Linux

2010-05-20 Thread Brian Pratt
Can you post the various files to the spctools-discuss files area? Sounds like the kind of thing one needs to see in operation to diagnose. Brian On Thu, May 20, 2010 at 8:32 AM, Gradjanin Grada gox...@gmail.com wrote: Hello, I have problem running a search on X!tanden under Win7. Raw files

Re: [spctools-discuss] Re: Installing X! Tandem Under Linux

2010-05-20 Thread Brian Pratt
also, probably best to start a new thread - this hasn't got much to do with Installing X! Tandem Under Linux - Brian On Thu, May 20, 2010 at 1:28 PM, Brian Pratt brian.pr...@insilicos.com wrote: Can you post the various files to the spctools-discuss files area? Sounds like the kind of thing

[spctools-discuss] Re: SPC at ASMS!

2010-05-20 Thread Luis Mendoza
This upcoming week, the SPC software tools team will be hosting a booth at the ASMS Conference (#151, near the Employment Center; we're listed as the Institute for Systems Biology on the ASMS website.) Please feel free to drop by and say hello to me, and bring your PeptideAtlas/TPP-related

Re: [spctools-discuss] Re: SPC at ASMS!

2010-05-20 Thread Robert Winkler
Dear Luis, I'll try to make it. You are also invited to visit our poster: Rapid covalent pre-gel modification of proteins for their instant visualization and subsequent mass spectrometric characterization, Monday Poster Session, MP04 (Covalent Labeling), Slot 081. We covalently modify