Can you post the various files to the spctools-discuss files area? Sounds like the kind of thing one needs to see in operation to diagnose.
Brian On Thu, May 20, 2010 at 8:32 AM, Gradjanin Grada <[email protected]> wrote: > Hello, > I have problem running a search on X!tanden under Win7. > Raw files were generated by Waters qToF, I have used masswolf to convert > into mzxml. This is just a simple system test with cytochrome c and BSA, and > I am using the default parameters as set during the installation. Apache is > running without problems. > > > Here is the output: > > # Commands for session 7S8PSTNGJ on Thu May 20 17:32:42 2010 > # BEGIN COMMAND BLOCK > ###### BEGIN Command Execution ###### > [Thu May 20 17:32:42 2010] EXECUTING: run_in > c:/Inetpub/wwwroot/ISB/data/Systemtest; c:\Inetpub\tpp-bin\tandem > c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_1.tandem.params > > OUTPUT: > > command "c:\Inetpub\tpp-bin\tandem > c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_1.tandem.params" failed: > Unknown error > END OUTPUT > RETURN CODE:65280 > ###### End Command Execution ###### > > ###### BEGIN Command Execution ###### > [Thu May 20 17:32:43 2010] EXECUTING: run_in > c:/Inetpub/wwwroot/ISB/data/Systemtest; c:\Inetpub\tpp-bin\tandem > c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_2.tandem.params > OUTPUT: > > > command "c:\Inetpub\tpp-bin\tandem > c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_2.tandem.params" failed: > Unknown error > END OUTPUT > RETURN CODE:65280 > ###### End Command Execution ###### > # All finished at Thu May 20 17:32:43 2010 > > # END COMMAND BLOCK > > > Can anyone help? > > On Wed, May 19, 2010 at 7:47 PM, Brian Pratt <[email protected]> > wrote: >> >> Yes, those scripts work flawlessly against the (now somewhat old) EC2 >> base images mentioned in their comments. But I imagine they need >> tweaking when used with something newer - linux ecosystems can be >> pretty brittle, as you know. >> >> Brian >> >> On Wed, May 19, 2010 at 8:21 AM, EricTan <[email protected]> wrote: >> > Yes, I followed the instructions for Ubuntu installation almost >> > religiously. I ought to retrace my steps and make sure that my final >> > setup is the same as the information in the scripts. Just curious - >> > your implementation of TPP 4.3.1 in EC2 cloud follows the scripts >> > strictly and you are able to run all applications from Petunia? (Of >> > course I do not mean the step where a Thermo RAW file is converted to >> > mzML or mzXML.) >> > >> > I read your comment in another thread about configuring Apache. I >> > believe what I am facing very likely came from ill configured Apache >> > on my end. Still, I suspect I may need to check on user account >> > permissions as well. >> > >> > Cheers >> > Eric >> > >> > -- >> > You received this message because you are subscribed to the Google >> > Groups "spctools-discuss" group. >> > To post to this group, send email to [email protected]. >> > To unsubscribe from this group, send email to >> > [email protected]. >> > For more options, visit this group at >> > http://groups.google.com/group/spctools-discuss?hl=en. >> > >> > >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> > > > > -- > građanin > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
