also, probably best to start a new thread - this hasn't got much to do with "Installing X! Tandem Under Linux"
- Brian On Thu, May 20, 2010 at 1:28 PM, Brian Pratt <[email protected]> wrote: > Can you post the various files to the spctools-discuss files area? > Sounds like the kind of thing one needs to see in operation to > diagnose. > > Brian > > On Thu, May 20, 2010 at 8:32 AM, Gradjanin Grada <[email protected]> wrote: >> Hello, >> I have problem running a search on X!tanden under Win7. >> Raw files were generated by Waters qToF, I have used masswolf to convert >> into mzxml. This is just a simple system test with cytochrome c and BSA, and >> I am using the default parameters as set during the installation. Apache is >> running without problems. >> >> >> Here is the output: >> >> # Commands for session 7S8PSTNGJ on Thu May 20 17:32:42 2010 >> # BEGIN COMMAND BLOCK >> ###### BEGIN Command Execution ###### >> [Thu May 20 17:32:42 2010] EXECUTING: run_in >> c:/Inetpub/wwwroot/ISB/data/Systemtest; c:\Inetpub\tpp-bin\tandem >> c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_1.tandem.params >> >> OUTPUT: >> >> command "c:\Inetpub\tpp-bin\tandem >> c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_1.tandem.params" failed: >> Unknown error >> END OUTPUT >> RETURN CODE:65280 >> ###### End Command Execution ###### >> >> ###### BEGIN Command Execution ###### >> [Thu May 20 17:32:43 2010] EXECUTING: run_in >> c:/Inetpub/wwwroot/ISB/data/Systemtest; c:\Inetpub\tpp-bin\tandem >> c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_2.tandem.params >> OUTPUT: >> >> >> command "c:\Inetpub\tpp-bin\tandem >> c:/Inetpub/wwwroot/ISB/data/Systemtest/CCBSA_2.tandem.params" failed: >> Unknown error >> END OUTPUT >> RETURN CODE:65280 >> ###### End Command Execution ###### >> # All finished at Thu May 20 17:32:43 2010 >> >> # END COMMAND BLOCK >> >> >> Can anyone help? >> >> On Wed, May 19, 2010 at 7:47 PM, Brian Pratt <[email protected]> >> wrote: >>> >>> Yes, those scripts work flawlessly against the (now somewhat old) EC2 >>> base images mentioned in their comments. But I imagine they need >>> tweaking when used with something newer - linux ecosystems can be >>> pretty brittle, as you know. >>> >>> Brian >>> >>> On Wed, May 19, 2010 at 8:21 AM, EricTan <[email protected]> wrote: >>> > Yes, I followed the instructions for Ubuntu installation almost >>> > religiously. I ought to retrace my steps and make sure that my final >>> > setup is the same as the information in the scripts. Just curious - >>> > your implementation of TPP 4.3.1 in EC2 cloud follows the scripts >>> > strictly and you are able to run all applications from Petunia? (Of >>> > course I do not mean the step where a Thermo RAW file is converted to >>> > mzML or mzXML.) >>> > >>> > I read your comment in another thread about configuring Apache. I >>> > believe what I am facing very likely came from ill configured Apache >>> > on my end. Still, I suspect I may need to check on user account >>> > permissions as well. >>> > >>> > Cheers >>> > Eric >>> > >>> > -- >>> > You received this message because you are subscribed to the Google >>> > Groups "spctools-discuss" group. >>> > To post to this group, send email to [email protected]. >>> > To unsubscribe from this group, send email to >>> > [email protected]. >>> > For more options, visit this group at >>> > http://groups.google.com/group/spctools-discuss?hl=en. >>> > >>> > >>> >>> -- >>> You received this message because you are subscribed to the Google Groups >>> "spctools-discuss" group. >>> To post to this group, send email to [email protected]. >>> To unsubscribe from this group, send email to >>> [email protected]. >>> For more options, visit this group at >>> http://groups.google.com/group/spctools-discuss?hl=en. >>> >> >> >> >> -- >> građanin >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
