Yes there is MS2 spectrum in the file. On Jan 5, 4:22 pm, Joe Slagel <[email protected]> wrote: > Do you have MS2 spectrum in the file? Please see > > http://www.mail-archive.com/[email protected]/msg0274... > > > > On Wed, Jan 5, 2011 at 3:07 PM, Spencer <[email protected]> wrote: > > I have been trying to use the ability to perform an xtandem search in > > TPP 4.4rev1. I initially had problems with it saying the file is > > corrupt but after changing the extension it seemed to work but now I > > get an error. The file was exported from an Agilent .d file, but I > > know it works with the standalone install of X! Tandem. > > > Does anyone have an idea what this error means? The output is below. > > Thank you. > > > # Commands for session FHLKKV7M3 on Wed Jan 5 15:46:00 2011 > > # BEGIN COMMAND BLOCK > > ###### BEGIN Command Execution ###### > > [Wed Jan 5 15:46:00 2011] EXECUTING: run_in c:/Inetpub/wwwroot/ISB/ > > data/oetzitest2; c:\Inetpub\tpp-bin\tandem c:/Inetpub/wwwroot/ISB/data/ > > oetzitest2/otzi_14.tandem.params > > OUTPUT: > > > X! TANDEM 2009.10.01.1 (LabKey and ISB) > > > Loading spectra . loaded. > > No input spectra met the acceptance criteria. > > > command "c:\Inetpub\tpp-bin\tandem c:/Inetpub/wwwroot/ISB/data/ > > oetzitest2/otzi_14.tandem.params" failed: Operation not permitted > > END OUTPUT > > RETURN CODE:256 > > ###### End Command Execution ###### > > # All finished at Wed Jan 5 15:46:00 2011 > > # END COMMAND BLOCK > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]<spctools-discuss%[email protected]> > > . > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en. > > -- > Joe Slagel > Institute for Systems Biology > [email protected] > (206) 732-1362
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