Is centroiding (peak picking) without vendor software implemented?
The interface for doing this is clearly suggested in the msconvert
help:
peakPicking prefer_vendor:<true|false> int_set(MS levels)
I run this kind of command on a system without thermo libraries:
./pwiz_bin/msconvert Hek_cells_100904050914.mzXML --mzXML -z --
filter "peakPicking false [1]" -o centroided_by_pwiz
It generates an output file that is identical to the profile file, but
with the added line:
<dataProcessing centroided="1">
So, it would appear that no vendor-less centroiding is yet
implemented. Can this be confirmed?
Much thanks for all the hard work on an outstanding tool set in
general.
--John
--
You received this message because you are subscribed to the Google Groups
"spctools-discuss" group.
To post to this group, send email to [email protected].
To unsubscribe from this group, send email to
[email protected].
For more options, visit this group at
http://groups.google.com/group/spctools-discuss?hl=en.
