Hi! Thanks for the suggestion! I removed all of the spaces and alternate characters and am still getting the same error messages. Is there anything else I should try? Should I recheck my parameters file?
Thanks! Kierstin - c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem (*file not found:* not created or deleted?) - c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem.pep.xml (*file not found:* not created or deleted?) Command 1 *[Mon Jul 22 12:11:18 2013] * [ Show / Hide ] run_in c:/Inetpub/wwwroot/ISB/data/Tandem; c:\Inetpub\tpp-bin\tandem c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem.params ------------------------------ X! TANDEM 2010.10.01.1 (LabKey, Insilicos and ISB) Loading spectra . This application has requested the Runtime to terminate it in an unusual way. Please contact the application's support team for more information. command "c:\Inetpub\tpp-bin\tandem c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem.params" failed: No such process *Command FAILED* Command 2 *[Mon Jul 22 12:11:19 2013] * [ Show / Hide ] run_in c:/Inetpub/wwwroot/ISB/data/Tandem; c:\Inetpub\tpp-bin\Tandem2XML c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem.pep.xml ------------------------------ Failed to open input file 'c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem'. command "c:\Inetpub\tpp-bin\Tandem2XML c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem c:/Inetpub/wwwroot/ISB/data/Tandem/MS13668QE_sample2.tandem.pep.xml" failed: Operation not permitted *Command FAILED* On Wednesday, July 17, 2013 7:28:22 PM UTC-4, Jimmy Eng wrote: > > Along these lines, everyone should simply avoid any symbols in directory > and file names. There are some character symbols that are OK (I tell folks > to use dash '-' and underscore '_' only besides letters and numbers) but > it's best to avoid them all if you don't know which ones will work. > > > On Wed, Jul 17, 2013 at 3:28 PM, Brian Hampton > <[email protected]<javascript:> > > wrote: > >> Well, I could be wrong, but that space in the directory name is probably >> the culprit. I would rename the directory .../data/X! Tandem to something >> without a space in it. Just call it .../data/tandem instead. >> >> Cheers, >> >> Brian >> >> Brian Hampton >> Protein Analysis Lab >> Center for Vascular and Inflammatory Diseases >> University of Maryland School of Medicine >> 800 West Baltimore Street Rm 307 >> Baltimore MD 21201 >> V: 410-706-8207 >> F: 410-706-8234 >> >> >> On Wed, Jul 17, 2013 at 5:24 PM, Kierstin Schmidt >> <[email protected]<javascript:> >> > wrote: >> >>> Hi! >>> I am a new user of TPP. I am trying to load my mzXML files to be >>> searched by X! Tandem, and I keep getting the following errors. If anyone >>> has advice, it would be greatly appreciated! >>> >>> Thanks! >>> >>> Kierstin >>> >>> >>> "c:/Inetpub/wwwroot/ISB/data/X! Tandem/MS138QE_sample2.tandem.pep.xml ( >>> *file not found:* not created or deleted?) >>> >>> Followed by >>> >>> run_in c:/Inetpub/wwwroot/ISB/data/X!Tandem; c:\Inetpub\tpp-bin\tandem >>> c:/Inetpub/wwwroot/ISB/data/X! Tandem/MS138QE_sample2.tandem.params >>> >>> ------------------------------ >>> >>> X! TANDEM 2010.10.01.1 (LabKey, Insilicos and ISB) >>> >>> Loading spectra . >>> Failed to open: "c:/Inetpub/wwwroot/ISB/data/X!Tandem" >>> The input parameter file "c:/Inetpub/wwwroot/ISB/data/X!Tandem" could not >>> be located. >>> Check the file path name and try again. >>> >>> >>> An error was detected while loading the input parameters. >>> Please follow the advice above or contact a GPM administrator to help you. >>> command "c:\Inetpub\tpp-bin\tandem c:/Inetpub/wwwroot/ISB/data/X! >>> Tandem/MS138QE_sample2.tandem.params" failed: Unknown error >>> >>> *Command FAILED* >>> >>> >>> Command 2 *[Wed Jul 17 17:11:38 2013] * [ Show / Hide ] >>> >>> run_in c:/Inetpub/wwwroot/ISB/data/X!Tandem; c:\Inetpub\tpp-bin\Tandem2XML >>> c:/Inetpub/wwwroot/ISB/data/X! Tandem/MS138QE_sample2.tandem >>> c:/Inetpub/wwwroot/ISB/data/X! Tandem/MS138QE_sample2.tandem.pep.xml >>> >>> ------------------------------ >>> >>> c:\Inetpub\tpp-bin\Tandem2XML(TPP v4.5 RAPTURE rev 2, Build 201202031108 >>> (MinGW)) >>> Usage: c:\Inetpub\tpp-bin\Tandem2XML <input-file> [<output-file>] >>> >>> command "c:\Inetpub\tpp-bin\Tandem2XML c:/Inetpub/wwwroot/ISB/data/X! >>> Tandem/MS138QE_sample2.tandem c:/Inetpub/wwwroot/ISB/data/X! >>> Tandem/MS138QE_sample2.tandem.pep.xml" failed: Operation not permitted >>> >>> *Command FAILED* >>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected] <javascript:>. >>> To post to this group, send email to >>> [email protected]<javascript:> >>> . >>> Visit this group at http://groups.google.com/group/spctools-discuss. >>> For more options, visit https://groups.google.com/groups/opt_out. >>> >>> >>> >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected] <javascript:>. >> To post to this group, send email to >> [email protected]<javascript:> >> . >> Visit this group at http://groups.google.com/group/spctools-discuss. >> For more options, visit https://groups.google.com/groups/opt_out. >> >> >> > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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