I had same issues few days ago. I went thru scripts and saw some issues
Here is my workaround
mkdir -p ./extern/ProteoWizard/pwiz-msi
That will download file VERSION. However the format is not good as it has
spaces instead of dot)
Now you need to change Makefile so that it doesn't download VERSION anymore
by commenting the following lines:
# rm -f $(PWIZ_MSIDIR)/VERSION
# wget -nv -O $(PWIZ_MSIDIR)/VERSION $(PWIZ_TCMSI)/VERSION\?guest=1
Then you should be good to go
Hope that helps
On Monday, October 17, 2016 at 10:51:36 AM UTC-7, Ali wrote:
> Dear all
> Our cluster administrator is getting the following error on Centos Linux
> x86_84 when he wants to install TPP v5.0. Does any one know what might be
> the problem and how can we fix the issue?
> [root@compute-0-000 TPP_5.0.0-src]# make all
> /shared/apps/TPP/TPP_5.0.0-src/extern/ProteoWizard/Makefile:353: warning:
> overriding commands for target `/shared/apps/TPP/TPP_5.0.0-
> common.mk:449: warning: ignoring old commands for target
> make: *** No rule to make target `/shared/apps/TPP/TPP_5.0.0-
> src/extern/ProteoWizard/pwiz-msi', needed by
> [root@compute-0-000 TPP_5.0.0-src]#
> Some packages did not get downloaded with the source code ...?
> Thank you very much,
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