Dear Jean Christophe We are still having issue with the installation. After applying your solution he is now getting the following error:
*[root@nkr-rc-neu TPP_5.0.0-src]# mkdir -p ./extern/ProteoWizard/pwiz-msi* *[root@nkr-rc-neu TPP_5.0.0-src]# make pwiz-msi* */root/TPP_5.0.0-src/extern/ProteoWizard/Makefile:353: warning: overriding commands for target `/root/TPP_5.0.0-src/build/linux-x86_64'* *common.mk:448 <http://common.mk:448/>: warning: ignoring old commands for target `/root/TPP_5.0.0-src/build/linux-x86_64'* *rm -f /root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi/VERSION* *wget -nv -O /root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi/VERSION https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/VERSION\?guest=1 <https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/VERSION%5C?guest=1>* *2016-10-19 12:28:37 URL:https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/VERSION?guest=1 <https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/VERSION?guest=1> [9/9] -> "/root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi/VERSION" [1]* *rm -f pwiz-setup-*-x86_64.msi* *wget --content-disposition -nv -P /root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi \* * https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/pwiz-setup-3 <https://teamcity.labkey.org/repository/download/bt83/.lastSuccessful/pwiz-setup-3> 0 10107-x86_64.msi\?guest=1* *Authorization failed.* *wget: unable to resolve host address “10107-x86_64.msi”* *make: *** [pwiz-msi] Error 4* *[root@nkr-rc-neu TPP_5.0.0-src]# vi ./extern/ProteoWizard/Makefile* *[root@nkr-rc-neu TPP_5.0.0-src]# make all* */root/TPP_5.0.0-src/extern/ProteoWizard/Makefile:353: warning: overriding commands for target `/root/TPP_5.0.0-src/build/linux-x86_64'* *common.mk:448 <http://common.mk:448/>: warning: ignoring old commands for target `/root/TPP_5.0.0-src/build/linux-x86_64'* *cp /root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi/ /root/TPP_5.0.0-src/build/linux-x86_64* *cp: omitting directory `/root/TPP_5.0.0-src/extern/ProteoWizard/pwiz-msi/'* *make: *** [/root/TPP_5.0.0-src/build/linux-x86_64] Error 1* *[root@nkr-rc-neu TPP_5.0.0-src]#* Do you know what should we do now? Many Thanks. Sincerely, Ali On Wednesday, October 19, 2016 at 2:38:56 AM UTC-4, Jean-Christophe Ducom wrote: > > I had same issues few days ago. I went thru scripts and saw some issues > with pwiz-msi. > Here is my workaround > cd TPP_5.0.0-src > > mkdir -p ./extern/ProteoWizard/pwiz-msi > > make pwiz-msi > > That will download file VERSION. However the format is not good as it has > spaces instead of dot) > > vi ./extern/ProteoWizard/pwiz-msi/VERSION > > 3.0.10095 > > > Now you need to change Makefile so that it doesn't download VERSION > anymore by commenting the following lines: > > vi ./extern/ProteoWizard/Makefile > > pwiz-msi-version : > > # rm -f $(PWIZ_MSIDIR)/VERSION > > # wget -nv -O $(PWIZ_MSIDIR)/VERSION $(PWIZ_TCMSI)/VERSION\?guest=1 > > > Then you should be good to go > > make all > > > Hope that helps > JC > > On Monday, October 17, 2016 at 10:51:36 AM UTC-7, Ali wrote: >> >> Dear all >> >> Our cluster administrator is getting the following error on Centos Linux >> x86_84 when he wants to install TPP v5.0. Does any one know what might >> be the problem and how can we fix the issue? >> >> >> [root@compute-0-000 TPP_5.0.0-src]# make all >> >> /shared/apps/TPP/TPP_5.0.0-src/extern/ProteoWizard/Makefile:353: >> warning: overriding commands for target `/shared/apps/TPP/TPP_5.0.0- >> src/build/linux-x86_64' >> >> common.mk:449: warning: ignoring old commands for target >> `/shared/apps/TPP/TPP_5.0.0-src/build/linux-x86_64' >> >> make: *** No rule to make target `/shared/apps/TPP/TPP_5.0.0- >> src/extern/ProteoWizard/pwiz-msi', needed by >> `/shared/apps/TPP/TPP_5.0.0-src/build/linux-x86_64'. >> Stop. >> >> [root@compute-0-000 TPP_5.0.0-src]# >> >> >> Some packages did not get downloaded with the source code ...? >> >> >> Thank you very much, >> Ali >> > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
