I would use msconvert from proteoWizard, It's part of the TPP. The command line would look like this:
>msconvert yourFile.mgf --mzML you can also simply type "msconvert" for examples of the many conversion options available to you. Cheers, Mike -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
