Hi Rolf This is interesting but not what I can really discuss about, but I'd contribute one or two hints:
One really nice thing (I've seen it in other tree viewers) would be the ability for the user to pull a node and have the whole thing rearrange dynamically. That's a force field and Jmol already does this with dragMinimze. However, probably not easy to achieve seeing the complexity of your trees (i.e. many "bonds" tied to an "atom"). > Q: Does JSmol allow that an atom is part of more than one residue or > would this interfere with something? Quick answer: no atom can belong to 2 residues. But I would forget about "residues". I'd just define Jmol variables as atom sets and assign each node to as many of them as you wish (using a script). It is as easy to select by user variables / atomsets as by residue. Another possibility is to assign custom atom properties, instead of atom sets. ------------------------------------------------------------------------------ Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311&iu=/4140/ostg.clktrk _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
