You can use mri_binarize --i ThalamicNuclei.v10.T1.mgz --replace-only
segid segidreplace ... --o newseg.mgz
to create a new segmentation with merged segments, then using
vol2subfield with the newseg seg as --sf
On 4/29/2020 7:57 PM, std...@virgilio.it wrote:
External Email - Use Caution
Hi list,
vol2subfield --i fmcpr.nii.gz --reg register.dof6.lta --sf
ThalamicNuclei.v10.T1.mgz --stats stats.dat --avgwf avgwf.dat
--avgwfvol avgwfvol.mgz --o f2subf.nii.gz
extracts the time course from each thalamic subregions.
If I would like to merge multiple regions (e.g. --id 8115 --id 8116)
and extract a single time course from them, which is the way?
Thanks
Stefano
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