Louise-Amélie Schmitt wrote: > > > > default_cluster_job_runner will remain for backwards compatibility, but > > we'll ship a sample job_conf.xml that runs everything locally by > > default. > > > > --nate > > Haha, and I did that before realizing I could do just what I needed by > writing tool-specific pbs:// URLs at the end of the config file... I'm such > an idiot.
Haha, okay, I don't think i even noticed since I was distracted by your implementation being a step in the way we want to go with it. > But I really like what you did of it and I have a couple of questions. > > Concerning the single-threaded tools, what would happen if the number of > threads set in the xml file was >1 ? It'd consume extra slots, but the tool itself would just run as usual. > Could it be possible to forbid a tool to run on a given node? Hrm. In PBS you could do it using node properties/neednodes or resource requirements. I'd have to think a bit about how to do this in a more general way in the XML. --nate > > Thanks, > L-A > > > > > >> > >> Peter > >> ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/