Hi Neil,

I'm certainly not an apache expert so I might be giving you the wrong
advise, but try adding the following:
LoadModule proxy_module modules/mod_proxy.so
LoadModule proxy_http_module modules/mod_proxy_http.so

If above fails, try to go back to the simplest configuration mentioned
on the galaxy wiki:
http://wiki.g2.bx.psu.edu/Admin/Config/Apache%20Proxy
Thus:
RewriteEngine on
RewriteRule ^(.*) http://localhost:8080$1 [P]

Which would make your galaxy instance available on http://yourip

>From there you can further debug if it doesn't work :)

Cheers,
Jelle


On Thu, Aug 23, 2012 at 11:48 PM,  <neil.burd...@csiro.au> wrote:
> Hi Jelle,
>            I'm still having issues with Apache. I've moved
>
> RewriteEngine on
> RewriteRule ^/galaxy$ /galaxy/ [R]
> RewriteRule ^/galaxy/static/style/(.*) 
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
> RewriteRule ^/galaxy/static/scripts/(.*) 
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
> RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico 
> [L]
> RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt [L]
> RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P]
>
> from /var/www/.htaccess to /etc/apache2/httpd.conf
>
> I still get a "404 Not found" error when trying to access galaxy 
> (http://140.253.78.44/galaxy )
>
> http://140.253.78.44 still gets the "It Works!" Apache default index.html
>
> and http://140.253.78.44:8080 gets the galaxy page
>
> /var/log/apache2/error.log states...
>
> [Fri Aug 24 07:35:27 2012] [error] [client 140.253.78.44] File does not 
> exist: /var/www/favicon.ico
> [Fri Aug 24 07:36:25 2012] [error] [client 140.253.78.44] File does not 
> exist: /var/www/galaxy
>
> Now if I change httpd.conf and add the vitrtualHost tags to:
>
> ServerName localhost
> <VirtualHost *:80>
>   RewriteEngine on
>   RewriteRule ^/galaxy$ /galaxy/ [R]
>   RewriteRule ^/galaxy/static/style/(.*) 
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>   RewriteRule ^/galaxy/static/scripts/(.*) 
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>   RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
>   RewriteRule ^/galaxy/favicon.ico 
> /home/galaxy/galaxy-dist/static/favicon.ico [L]
>   RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt 
> [L]
>   RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P]
> </VirtualHost>
>
> I now get a "403 Forbidden" error when trying to access 
> (http://140.253.78.44/galaxy ) You don't have permission to access /galaxy/ 
> on this server, and /var/log/apache2/error.log states..
>
> [Fri Aug 24 07:45:33 2012] [error] [client 140.253.78.44] attempt to make 
> remote request from mod_rewrite without proxy enabled: 
> proxy:http://localhost:8080/
> [Fri Aug 24 07:45:34 2012] [error] [client 140.253.78.44] File does not 
> exist: /etc/apache2/htdocs
>
> Any help much appreciated
>
> Neil
> ________________________________________
> From: Jelle Scholtalbers [j.scholtalb...@gmail.com]
> Sent: Thursday, August 23, 2012 8:20 PM
> To: Burdett, Neil (ICT Centre, Herston - RBWH)
> Cc: galaxy-user@lists.bx.psu.edu
> Subject: Re: [galaxy-user] Installing galaxy with Apache ...
>
> Hi Neil,
>
> with your current apache configuration, you should probably see Galaxy
> at http://yourip/galaxy
> This is due to your Rewriterule /galaxy and for that you have also set
> proxy_prefix = /galaxy in your universe_wsgi.ini
>
> You should probably remove the empty galaxy directory under /var/www
> Furthermore, most of the time you will not need a directory with 777
> in your apache web/documentroot..
>
> Cheers,
> Jelle
>
> On Thu, Aug 23, 2012 at 8:34 AM,  <neil.burd...@csiro.au> wrote:
>> Hi
>>    I've installed galaxy with the default settings and it works fine.
>>
>> On a new Ubuntu machine I am trying to get galaxy running with Apache. But I 
>> am having problems, I've followed the documentation.
>>
>> After installing Apache I can put my ip address into a browser and I get 
>> message saying Apache is working fine. It displays a message from 
>> /var/www/index.html
>>
>> Now when I start galaxy I was assuming I would get redirected to the galaxy 
>> welcome page, but this doesn't happen and it remains at /var/www/index.html. 
>> To view the welcome page I have to add ":8080" after the ip address. Is this 
>> still required? I thought that Apache would know to redirect to my 
>> distribution....What am I doing wrong?
>>
>> /etc/apache2/sites-available/default-ssl and 
>> /etc/apache2/sites-available/default look like this ...
>>
>>         DocumentRoot /var/www
>>         <Directory />
>>                 Options FollowSymLinks
>>                 AllowOverride None
>>         </Directory>
>>         <Directory /var/www/>
>>                 Options Indexes FollowSymLinks MultiViews
>>                 AllowOverride None
>>                 Order allow,deny
>>                 allow from all
>>         </Directory>
>>
>>  etc ...
>>
>> /var/www/.htaccess
>>
>> RewriteEngine on
>> RewriteRule ^/galaxy$ /galaxy/ [R]
>> RewriteRule ^/galaxy/static/style/(.*) 
>> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>> RewriteRule ^/galaxy/static/scripts/(.*) 
>> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
>> RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico 
>> [L]
>> RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt 
>> [L]
>> RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P]
>>
>> I created an empty 'galaxy' directory with 777 permissions on it under 
>> /var/www
>>
>>
>> and universe_wsgi.ini
>>
>>
>> # Define the proxy-prefix filter.
>> [filter:proxy-prefix]
>> use = egg:PasteDeploy#prefix
>> prefix = /galaxy
>>
>> # ---- Galaxy ---------------------------------------------------------------
>>
>> # Configuration of the Galaxy application.
>>
>> [app:main]
>> filter-with = proxy-prefix
>> cookie_path = /galaxy
>>
>>
>> Thanks Neil
>>
>>
>> ___________________________________________________________
>> The Galaxy User list should be used for the discussion of
>> Galaxy analysis and other features on the public server
>> at usegalaxy.org.  Please keep all replies on the list by
>> using "reply all" in your mail client.  For discussion of
>> local Galaxy instances and the Galaxy source code, please
>> use the Galaxy Development list:
>>
>>   http://lists.bx.psu.edu/listinfo/galaxy-dev
>>
>> To manage your subscriptions to this and other Galaxy lists,
>> please use the interface at:
>>
>>   http://lists.bx.psu.edu/

___________________________________________________________
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Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

  http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
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