yea, something seems messed up. For example, the numpy problem was fixed on beta 6 and should still be fixed in beta 7. It looks like somehow you have old files hanging around which are causing problems. Hopefully make distclean will clean everything and let you start fresh.
On Monday, February 8, 2021 at 2:25:16 PM UTC-5 Trevor Karn wrote: > I must have typed it wrong. The second option you gave failed on numpy, > but I tried the first option again, and it is compiling. > > Best Regards, > > Trevor Karn > > > On Mon, Feb 8, 2021 at 11:31 AM Zachary Scherr <[email protected]> wrote: > >> Are you sure you typed it correctly? Maybe try running >> >> ./bootstrap >> >> to make sure that the make targets are in order. >> >> On Monday, February 8, 2021 at 12:27:01 PM UTC-5 Trevor Karn wrote: >> >>> I tried make distclean and got an error “make: *** No rule to make >>> target ‘distclean’. Stop.” >>> >>> So I tried your second suggestion and it seems to be working so far, but >>> it is still compiling. >>> >>> On Mon, Feb 8, 2021 at 10:29 AM Zachary Scherr <[email protected]> wrote: >>> >>>> Probably the thing to try would be: >>>> >>>> make distclean >>>> >>>> and then you can build from scratch via: >>>> >>>> ./bootstrap >>>> source .homebrew-build-env >>>> ./configure >>>> make -j4 build >>>> >>>> But if you want to try cleaning wheel first before starting from >>>> scratch, you could just try >>>> >>>> make wheel-clean >>>> make -j4 build >>>> >>>> but it might be better to clean everything and start from scratch. >>>> >>>> On Monday, February 8, 2021 at 10:59:05 AM UTC-5 Trevor Karn wrote: >>>> >>>>> I do not see pep425tags.py in that directory. >>>>> >>>>> trevorkarn@Trevors-MacBook-Air sage % cd >>>>> /Users/trevorkarn/Applications/sage/local/lib/python3.9/site-packages/wheel/ >>>>> >>>>> trevorkarn@Trevors-MacBook-Air wheel % ls >>>>> >>>>> __init__.py __pycache__ cli metadata.py util.py wheelfile.py >>>>> >>>>> __main__.py bdist_wheel.py macosx_libfile.py pkginfo.py vendored >>>>> >>>>> Is there a way to clean the build environment? >>>>> >>>>> Best Regards, >>>>> >>>>> Trevor Karn >>>>> >>>>> >>>>> On Mon, Feb 8, 2021 at 9:54 AM Dima Pasechnik <[email protected]> >>>>> wrote: >>>>> >>>>>> the only explanation for pep425tags.py would be an unclean build >>>>>> environment - e.g. weird env vars set, or strange stuff in PATH. >>>>>> >>>>>> On Mon, Feb 8, 2021 at 3:51 PM Zachary Scherr <[email protected]> >>>>>> wrote: >>>>>> > >>>>>> > and do you see that pep425tags.py file in that directory? >>>>>> > >>>>>> > On Monday, February 8, 2021 at 10:21:09 AM UTC-5 Trevor Karn wrote: >>>>>> >> >>>>>> >> The only contents of the file you pointed me towards are >>>>>> >> >>>>>> >> __version__ = '0.36.2' >>>>>> >> >>>>>> >> Best Regards, >>>>>> >> >>>>>> >> Trevor Karn >>>>>> >> >>>>>> >> >>>>>> >> On Mon, Feb 8, 2021 at 9:09 AM Zachary Scherr <[email protected]> >>>>>> wrote: >>>>>> >>> >>>>>> >>> I really don't understand. The Cython log file shows that the >>>>>> problem is in >>>>>> >>> >>>>>> >>> >>>>>> /Users/trevorkarn/Applications/sage/local/lib/python3.9/site-packages/wheel/pep425tags.py >>>>>> >>> >>>>>> >>> I could be mistaken, but I don't think pep425tags.py has been a >>>>>> part of the wheel package for a while now. Certainly when I looked at >>>>>> wheel on my sage there was no such file. >>>>>> >>> >>>>>> >>> Can you go to your >>>>>> "/Users/trevorkarn/Applications/sage/local/lib/python3.9/site-packages/wheel/" >>>>>> >>>>>> directory and take a look at __init__.py. Does the version say 0.36.2? >>>>>> >>> >>>>>> >>> On Monday, February 8, 2021 at 9:32:20 AM UTC-5 Trevor Karn wrote: >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> Here is what I get. It seems like it is the same as yours? >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> trevorkarn@Trevors-MacBook-Air sage % brew info python3 >>>>>> >>>> >>>>>> >>>> [email protected]: stable 3.9.1 >>>>>> >>>> >>>>>> >>>> Interpreted, interactive, object-oriented programming language >>>>>> >>>> >>>>>> >>>> https://www.python.org/ >>>>>> >>>> >>>>>> >>>> /usr/local/Cellar/[email protected]/3.9.1_8 (8,665 files, 129.4MB) * >>>>>> >>>> >>>>>> >>>> Built from source on 2021-02-05 at 16:39:31 >>>>>> >>>> >>>>>> >>>> From: >>>>>> https://github.com/Homebrew/homebrew-core/blob/HEAD/Formula/[email protected] >>>>>> >>>> >>>>>> >>>> License: Python-2.0 >>>>>> >>>> >>>>>> >>>> ==> Dependencies >>>>>> >>>> >>>>>> >>>> Build: pkg-config ✔ >>>>>> >>>> >>>>>> >>>> Required: gdbm ✔, [email protected] ✔, readline ✔, sqlite ✔, tcl-tk ✔, >>>>>> xz ✔ >>>>>> >>>> >>>>>> >>>> ==> Caveats >>>>>> >>>> >>>>>> >>>> Python has been installed as >>>>>> >>>> >>>>>> >>>> /usr/local/bin/python3 >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> Unversioned symlinks `python`, `python-config`, `pip` etc. >>>>>> pointing to >>>>>> >>>> >>>>>> >>>> `python3`, `python3-config`, `pip3` etc., respectively, have >>>>>> been installed into >>>>>> >>>> >>>>>> >>>> /usr/local/opt/[email protected]/libexec/bin >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> You can install Python packages with >>>>>> >>>> >>>>>> >>>> pip3 install <package> >>>>>> >>>> >>>>>> >>>> They will install into the site-package directory >>>>>> >>>> >>>>>> >>>> /usr/local/lib/python3.9/site-packages >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> See: https://docs.brew.sh/Homebrew-and-Python >>>>>> >>>> >>>>>> >>>> ==> Analytics >>>>>> >>>> >>>>>> >>>> install: 755,419 (30 days), 2,396,024 (90 days), 2,995,387 (365 >>>>>> days) >>>>>> >>>> >>>>>> >>>> install-on-request: 244,063 (30 days), 714,665 (90 days), >>>>>> 799,812 (365 days) >>>>>> >>>> >>>>>> >>>> build-error: 0 (30 days) >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> Best Regards, >>>>>> >>>> >>>>>> >>>> Trevor Karn >>>>>> >>>> >>>>>> >>>> >>>>>> >>>> On Mon, Feb 8, 2021 at 8:17 AM Dima Pasechnik <[email protected]> >>>>>> wrote: >>>>>> >>>>> >>>>>> >>>>> Could it be that you need to update your Homebrew (?) python3 >>>>>> package? >>>>>> >>>>> What version do you have now? >>>>>> >>>>> E.g. on a box where the latest Sage builds I have >>>>>> >>>>> >>>>>> >>>>> % brew info python3 >>>>>> >>>>> >>>>>> >>>>> [email protected]: stable 3.9.1 (bottled) >>>>>> >>>>> Interpreted, interactive, object-oriented programming language >>>>>> >>>>> https://www.python.org/ >>>>>> >>>>> /usr/local/Cellar/[email protected]/3.9.1_8 (4,057 files, 67.8MB) * >>>>>> >>>>> Poured from bottle on 2021-02-06 at 10:13:24 >>>>>> >>>>> From: >>>>>> https://github.com/Homebrew/homebrew-core/blob/HEAD/Formula/[email protected] >>>>>> >>>>> >>>>>> >>>>> >>>>>> >>>>> On Mon, Feb 8, 2021 at 1:53 PM Trevor Karn <[email protected]> >>>>>> wrote: >>>>>> >>>>> > >>>>>> >>>>> > Ah I see, thanks for explaining. >>>>>> >>>>> > >>>>>> >>>>> > Here is my top-level config.log. >>>>>> >>>>> > >>>>>> >>>>> > Best Regards, >>>>>> >>>>> > >>>>>> >>>>> > Trevor Karn >>>>>> >>>>> > >>>>>> >>>>> > >>>>>> >>>>> > On Mon, Feb 8, 2021 at 7:09 AM Dima Pasechnik < >>>>>> [email protected]> wrote: >>>>>> >>>>> >> >>>>>> >>>>> >> >>>>>> >>>>> >> >>>>>> >>>>> >> On Mon, 8 Feb 2021, 13:02 Trevor Karn, <[email protected]> >>>>>> wrote: >>>>>> >>>>> >>> >>>>>> >>>>> >>> Thanks for sending that link. I am confused though, because >>>>>> it says a fix was issued. Does that mean it should work now? >>>>>> >>>>> >> >>>>>> >>>>> >> >>>>>> >>>>> >> sorry, I was not clear. What I meant to say that it appears >>>>>> to be a well-known issue in the Python@macOS universe, >>>>>> >>>>> >> and lately all seems to be OK with Sage. >>>>>> >>>>> >> >>>>>> >>>>> >> To figure out exactly goes wrong in your case, we need to >>>>>> know where Python3 used in Sage is coming from. >>>>>> >>>>> >> Please post the top-level config.log >>>>>> >>>>> >> >>>>>> >>>>> >> >>>>>> >>>>> >>> >>>>>> >>>>> >>> And yes, I am on the most recent develop branch >>>>>> >>>>> >>> >>>>>> >>>>> >>> On Mon, Feb 8, 2021 at 5:42 AM Dima Pasechnik < >>>>>> [email protected]> wrote: >>>>>> >>>>> >>>> >>>>>> >>>>> >>>> This seems to be well-known issue, see e.g >>>>>> >>>>> >>>> https://github.com/pypa/virtualenv/issues/2027 >>>>>> >>>>> >>>> >>>>>> >>>>> >>>> Are you on the most recent develop branch (9.3.beta7)? >>>>>> >>>>> >>>> >>>>>> >>>>> >>>> On Mon, Feb 8, 2021 at 9:20 AM Trevor Karn < >>>>>> [email protected]> wrote: >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > Hi, >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > I'm trying to build Sage from the source code. I cloned >>>>>> it from git, and tried to build from the develop branch using make from >>>>>> the >>>>>> sage directory. I ran into trouble building cython. The error message >>>>>> suggested that I email this group. Does anyone have any advice on how to >>>>>> proceed? >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > I am using macOS Big Sur 11.2 on a MacBook Air. >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > The log file is attached, this is from a second run - it >>>>>> failed once, and I tried running make a second time without any changes >>>>>> and >>>>>> this is the log from the second run, which returns the same error just >>>>>> without all of the info before it (eg. the flint installation). >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > Thanks so much. >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > Best, >>>>>> >>>>> >>>> > Trevor >>>>>> >>>>> >>>> > >>>>>> >>>>> >>>> > -- >>>>>> >>>>> >>>> > You received this message because you are subscribed to >>>>>> the Google Groups "sage-devel" group. >>>>>> >>>>> >>>> > To unsubscribe from this group and stop receiving emails >>>>>> from it, send an email to [email protected]. >>>>>> >>>>> >>>> > To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/1c93ec2e-86bd-45f0-bba0-cc254a392305n%40googlegroups.com >>>>>> . >>>>>> >>>>> >>>> >>>>>> >>>>> >>>> -- >>>>>> >>>>> >>>> You received this message because you are subscribed to a >>>>>> topic in the Google Groups "sage-devel" group. >>>>>> >>>>> >>>> To unsubscribe from this topic, visit >>>>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>>>> >>>>> >>>> To unsubscribe from this group and all its topics, send an >>>>>> email to [email protected]. >>>>>> >>>>> >>>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAAWYfq3CFFAYzUtNnSrt_RPKW7X_p8j_VXGtZbKLWG%2BST%3DCO%2BQ%40mail.gmail.com >>>>>> . >>>>>> >>>>> >>> >>>>>> >>>>> >>> -- >>>>>> >>>>> >>> Best, >>>>>> >>>>> >>> >>>>>> >>>>> >>> Trevor >>>>>> >>>>> >>> >>>>>> >>>>> >>> -- >>>>>> >>>>> >>> You received this message because you are subscribed to the >>>>>> Google Groups "sage-devel" group. >>>>>> >>>>> >>> To unsubscribe from this group and stop receiving emails >>>>>> from it, send an email to [email protected]. >>>>>> >>>>> >>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAJ6VCMAVGG57CHovd7zoXa0C3Nxsr3WfXi0FWwapKrDfup7_sA%40mail.gmail.com >>>>>> . >>>>>> >>>>> >> >>>>>> >>>>> >> -- >>>>>> >>>>> >> You received this message because you are subscribed to a >>>>>> topic in the Google Groups "sage-devel" group. >>>>>> >>>>> >> To unsubscribe from this topic, visit >>>>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>>>> >>>>> >> To unsubscribe from this group and all its topics, send an >>>>>> email to [email protected]. >>>>>> >>>>> >> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAAWYfq026cNP9FTmBySPskZZoc%2BH4ykTQO7je6TW4YTkirg_qw%40mail.gmail.com >>>>>> . >>>>>> >>>>> > >>>>>> >>>>> > -- >>>>>> >>>>> > You received this message because you are subscribed to the >>>>>> Google Groups "sage-devel" group. >>>>>> >>>>> > To unsubscribe from this group and stop receiving emails from >>>>>> it, send an email to [email protected]. >>>>>> >>>>> > To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAJ6VCMDJEN7KzDmvB0x0GDrXiQrK3F_e_eBZvSJf-JxVre0n-Q%40mail.gmail.com >>>>>> . >>>>>> >>>>> >>>>>> >>>>> -- >>>>>> >>>>> You received this message because you are subscribed to a topic >>>>>> in the Google Groups "sage-devel" group. >>>>>> >>>>> To unsubscribe from this topic, visit >>>>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>>>> >>>>> To unsubscribe from this group and all its topics, send an >>>>>> email to [email protected]. >>>>>> >>>>> >>>>>> >>>>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAAWYfq3meWN5AWip9BG5GzJ%3DFfLvoHKFrpS6Ezmq4X2GWH8mQw%40mail.gmail.com >>>>>> . >>>>>> >>> >>>>>> >>> -- >>>>>> >>> You received this message because you are subscribed to a topic >>>>>> in the Google Groups "sage-devel" group. >>>>>> >>> To unsubscribe from this topic, visit >>>>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>>>> >>> To unsubscribe from this group and all its topics, send an email >>>>>> to [email protected]. >>>>>> >>> >>>>>> >>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/c02796d9-9057-41e2-829f-eeb933132d42n%40googlegroups.com >>>>>> . >>>>>> > >>>>>> > -- >>>>>> > You received this message because you are subscribed to the Google >>>>>> Groups "sage-devel" group. >>>>>> > To unsubscribe from this group and stop receiving emails from it, >>>>>> send an email to [email protected]. >>>>>> >>>>> > To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/bd636baa-f6b1-42f7-866b-77ba0af40b6en%40googlegroups.com >>>>>> . >>>>>> >>>>>> -- >>>>>> You received this message because you are subscribed to a topic in >>>>>> the Google Groups "sage-devel" group. >>>>>> To unsubscribe from this topic, visit >>>>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>>>> To unsubscribe from this group and all its topics, send an email to >>>>>> [email protected]. >>>>>> >>>>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAAWYfq08zf6vp0LfT%2BGfAy25ML95cxTyxAQho9gB_UdGjqpHFA%40mail.gmail.com >>>>>> . >>>>>> >>>>> -- >>>> You received this message because you are subscribed to a topic in the >>>> Google Groups "sage-devel" group. >>>> To unsubscribe from this topic, visit >>>> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >>>> To unsubscribe from this group and all its topics, send an email to >>>> [email protected]. >>>> >>> To view this discussion on the web visit >>>> https://groups.google.com/d/msgid/sage-devel/c6d5aec3-7f1c-4dc7-a94b-d1e2ab5fdf53n%40googlegroups.com >>>> >>>> <https://groups.google.com/d/msgid/sage-devel/c6d5aec3-7f1c-4dc7-a94b-d1e2ab5fdf53n%40googlegroups.com?utm_medium=email&utm_source=footer> >>>> . >>>> >>> -- >>> Best, >>> >>> Trevor >>> >> -- >> You received this message because you are subscribed to a topic in the >> Google Groups "sage-devel" group. >> To unsubscribe from this topic, visit >> https://groups.google.com/d/topic/sage-devel/TmbLnmwz2mg/unsubscribe. >> To unsubscribe from this group and all its topics, send an email to >> [email protected]. >> > To view this discussion on the web visit >> https://groups.google.com/d/msgid/sage-devel/47b9954f-e37a-4a81-a7f4-7747b8139e5an%40googlegroups.com >> >> <https://groups.google.com/d/msgid/sage-devel/47b9954f-e37a-4a81-a7f4-7747b8139e5an%40googlegroups.com?utm_medium=email&utm_source=footer> >> . >> > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/415b45c0-6ee0-41bf-ab36-0a82153fd66fn%40googlegroups.com.
