#9808: Upgrade numpy to 1.5.0 and scipy to 0.8
----------------------------------------------------------------------------------+
Reporter: maldun
| Owner: maldun
Type: task
| Status: needs_work
Priority: major
| Milestone: sage-4.6
Component: packages
| Keywords: numpy, scipy
Author: Stefan Reiterer, Francois Bissey, John Palmieri, David Kirkby
| Upstream: Reported upstream. Developers acknowledge bug.
Reviewer: Karl-Dieter Crisman, David Kirkby, Leif Leonhardy, Francois
Bissey | Merged:
Work_issues:
|
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Old description:
> This ticket updates two packages, which must be updated together.
>
> The packages can be found found under:
>
> http://sage.math.washington.edu/home/palmieri/misc/numpy-1.5.0.spkg
>
> http://boxen.math.washington.edu/home/kirkby/patches/scipy-0.8.spkg
>
> '''Important notes:'''
> after installing Numpy, one needs to execute sage -ba, or else one will
> get runtime warnings.
>
> trac_9808_numpy_doctest_change.patch in the attachment has to be applied,
> in order to get all doctests running because some of the output has
> changed.
>
> '''For reviewers:'''
> changes.txt holds a summary of all changes with reference to the diffs,
> and links to other tickets
New description:
This ticket updates two packages, which must be updated together.
The packages can be found found under:
http://sage.math.washington.edu/home/palmieri/SPKG/numpy-1.5.0.spkg
http://boxen.math.washington.edu/home/kirkby/patches/scipy-0.8.spkg
'''Important notes:'''
after installing Numpy, one needs to execute sage -ba, or else one will
get runtime warnings.
trac_9808_numpy_doctest_change.patch in the attachment has to be applied,
in order to get all doctests running because some of the output has
changed.
'''For reviewers:'''
changes.txt holds a summary of all changes with reference to the diffs,
and links to other tickets
--
Comment(by jhpalmieri):
Dave: Is this the sort of change you had in mind?
{{{
#!diff
diff -r 1c2a7c8515fc spkg-install
--- a/spkg-install Tue Oct 05 22:35:34 2010 -0400
+++ b/spkg-install Wed Oct 06 15:07:58 2010 -0700
@@ -37,11 +37,13 @@
unset ATLAS
unset BLAS
unset LAPACK
- export FC="sage_fortran"
else
export LDFLAGS="${LDFLAGS} -shared"
fi
export FC="${SAGE_LOCAL}/bin/sage_fortran"
+export F77="${SAGE_LOCAL}/bin/sage_fortran"
+export F90="${SAGE_LOCAL}/bin/sage_fortran"
+export F95="${SAGE_LOCAL}/bin/sage_fortran"
export NUMPY_FCONFIG="config_fc --noopt --noarch"
################################################
}}}
I've prepared a new spkg in
[http://sage.math.washington.edu/home/palmieri/SPKG/numpy-1.5.0.spkg].
(This is not the same place as the previous one. I'm updating the ticket
description with this new version.)
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/9808#comment:217>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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