Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-25 Thread John Mikes
Thanks, Russell, you still teach physics.

I fell into bad styling when wanted to refer to phenomena BEYOND it, just
as there was EM before it was detected, there was electricity and gravity
before the words were invented and so on. What may be in the future is not
anticipateable if we have no lead to them within our existing inventory.

Your words




*...Different instruments are used fordifferent bands, but they all
overlap and are cailbrated against eachother. I understand that the gamma
ray spectrum is unbounded, sinceany photon with sufficient energy to knock
an electron out of an atom...*

are still physics 101 - what I accept - but my agnosticism goes further in
the expectation of novelties.
I may go into 'pseudoscience' - or even 'antiscience' but keep an open mind
for the so far unimaginable. I resist to statements like NOTHING ELSE.
Please forgive...

John Mikes


On Tue, Jun 24, 2014 at 7:58 PM, Russell Standish li...@hpcoders.com.au
wrote:

 On Tue, Jun 24, 2014 at 04:31:00PM -0400, John Mikes wrote:
  Russell:
  you wrote:
 
 
  *Not really - the peak of the solar spectrum is yellow light. The IR and
 UV*
  *portions are relatively small components, and what little there is is
  further absorbed by water vapour and the ozone layer respectively.*
 
  Is ALL you do mean the SOLAR (!) spectrum we can detect with our
  instruments?
  Are you sure there is nothing else? Liz mentioned EM spectrum *total*.
 What
  is included in it beyond the above (as part of our unknowables)?
  John M
 

 Nothing. We can measure everything in the EM spectrum from sub 1Hz up
 to high energy gamma rays. Different instruments are used for
 different bands, but they all overlap and are cailbrated against each
 other. I understand that the gamma ray spectrum is unbounded, since
 any photon with sufficient energy to knock an electron out of an atom
 (ionising radiation) will be detected by a photomultiplier, regardless
 of whether it is the photoelectric effect, the Comptom effect or pair
 production that is involved. The sub 1Hz spectrum really is
 unimportant, as there is no useful energy in a photon whose wavelength
 is bigger than the Earth.

 We also have a well established theory called blackbody radiation
 that gives a distribution of photon energies being emitted from a body
 at a given temperature. The sun's distribution fits that perfectly, so
 we have sound theoretical reasons why it is not emitting anything
 appreciable outside that spectrum.

 Obviously, the name blackbody radiator is a misnomer, as it needn't
 be black, as in the Sun's case. Another example of a blackbody
 radiator is the incandescent lightglobe (when turned on!).

 --


 
 Prof Russell Standish  Phone 0425 253119 (mobile)
 Principal, High Performance Coders
 Visiting Professor of Mathematics  hpco...@hpcoders.com.au
 University of New South Wales  http://www.hpcoders.com.au

  Latest project: The Amoeba's Secret
  (http://www.hpcoders.com.au/AmoebasSecret.html)

 

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-25 Thread Russell Standish
Hi John,

Actually, I think you fell into a trap specifying the EM spectrum (which
is well characterised, and has no unknowns about it), rather than
something vague like energy or radiation.

It is entirely possible that life has evolved a way of making use of
some unknown source of radiant energy - unlikely, but possible.

What is not possible is that life has evolved a way of making use of
unknown electromagnetic energy, because there's no such thing.

Hope that helps :).

Cheers

On Wed, Jun 25, 2014 at 04:36:18PM -0400, John Mikes wrote:
 Thanks, Russell, you still teach physics.
 
 I fell into bad styling when wanted to refer to phenomena BEYOND it, just
 as there was EM before it was detected, there was electricity and gravity
 before the words were invented and so on. What may be in the future is not
 anticipateable if we have no lead to them within our existing inventory.
 
 Your words
 
 
 
 
 *...Different instruments are used fordifferent bands, but they all
 overlap and are cailbrated against eachother. I understand that the gamma
 ray spectrum is unbounded, sinceany photon with sufficient energy to knock
 an electron out of an atom...*
 
 are still physics 101 - what I accept - but my agnosticism goes further in
 the expectation of novelties.
 I may go into 'pseudoscience' - or even 'antiscience' but keep an open mind
 for the so far unimaginable. I resist to statements like NOTHING ELSE.
 Please forgive...
 
 John Mikes
 
 
 On Tue, Jun 24, 2014 at 7:58 PM, Russell Standish li...@hpcoders.com.au
 wrote:
 
  On Tue, Jun 24, 2014 at 04:31:00PM -0400, John Mikes wrote:
   Russell:
   you wrote:
  
  
   *Not really - the peak of the solar spectrum is yellow light. The IR and
  UV*
   *portions are relatively small components, and what little there is is
   further absorbed by water vapour and the ozone layer respectively.*
  
   Is ALL you do mean the SOLAR (!) spectrum we can detect with our
   instruments?
   Are you sure there is nothing else? Liz mentioned EM spectrum *total*.
  What
   is included in it beyond the above (as part of our unknowables)?
   John M
  
 
  Nothing. We can measure everything in the EM spectrum from sub 1Hz up
  to high energy gamma rays. Different instruments are used for
  different bands, but they all overlap and are cailbrated against each
  other. I understand that the gamma ray spectrum is unbounded, since
  any photon with sufficient energy to knock an electron out of an atom
  (ionising radiation) will be detected by a photomultiplier, regardless
  of whether it is the photoelectric effect, the Comptom effect or pair
  production that is involved. The sub 1Hz spectrum really is
  unimportant, as there is no useful energy in a photon whose wavelength
  is bigger than the Earth.
 
  We also have a well established theory called blackbody radiation
  that gives a distribution of photon energies being emitted from a body
  at a given temperature. The sun's distribution fits that perfectly, so
  we have sound theoretical reasons why it is not emitting anything
  appreciable outside that spectrum.
 
  Obviously, the name blackbody radiator is a misnomer, as it needn't
  be black, as in the Sun's case. Another example of a blackbody
  radiator is the incandescent lightglobe (when turned on!).
 
  --
 
 
  
  Prof Russell Standish  Phone 0425 253119 (mobile)
  Principal, High Performance Coders
  Visiting Professor of Mathematics  hpco...@hpcoders.com.au
  University of New South Wales  http://www.hpcoders.com.au
 
   Latest project: The Amoeba's Secret
   (http://www.hpcoders.com.au/AmoebasSecret.html)
 
  
 
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Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  

Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-24 Thread John Mikes
Russell:
you wrote:


*Not really - the peak of the solar spectrum is yellow light. The IR and UV*
*portions are relatively small components, and what little there is is
further absorbed by water vapour and the ozone layer respectively.*

Is ALL you do mean the SOLAR (!) spectrum we can detect with our
instruments?
Are you sure there is nothing else? Liz mentioned EM spectrum *total*. What
is included in it beyond the above (as part of our unknowables)?
John M


On Sun, Jun 22, 2014 at 7:29 PM, Russell Standish li...@hpcoders.com.au
wrote:

 On Sun, Jun 22, 2014 at 11:19:24PM +1200, LizR wrote:
  Is it possible that plants are actually efficient in other parts of the
  spectrum that we can't see? Maybe they utilise a lot of infra red and
  ultraviolet, and the fact that there is a missed opportunity in visible
  green is a relatively insignificant blip?
 
  After all we only see less than one light octave. There's a LOT of EM
  radiation out there we can't detect.
 
  Or am I barking up the wrong tree? :-)
 

 Not really - the peak of the solar spectrum is yellow light. The IR and UV
 portions are relatively small components, and what little there is is
 further
 absorbed by water vapour and the ozone layer respectively.

 --


 
 Prof Russell Standish  Phone 0425 253119 (mobile)
 Principal, High Performance Coders
 Visiting Professor of Mathematics  hpco...@hpcoders.com.au
 University of New South Wales  http://www.hpcoders.com.au

  Latest project: The Amoeba's Secret
  (http://www.hpcoders.com.au/AmoebasSecret.html)

 

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-24 Thread Russell Standish
On Tue, Jun 24, 2014 at 04:31:00PM -0400, John Mikes wrote:
 Russell:
 you wrote:
 
 
 *Not really - the peak of the solar spectrum is yellow light. The IR and UV*
 *portions are relatively small components, and what little there is is
 further absorbed by water vapour and the ozone layer respectively.*
 
 Is ALL you do mean the SOLAR (!) spectrum we can detect with our
 instruments?
 Are you sure there is nothing else? Liz mentioned EM spectrum *total*. What
 is included in it beyond the above (as part of our unknowables)?
 John M
 

Nothing. We can measure everything in the EM spectrum from sub 1Hz up
to high energy gamma rays. Different instruments are used for
different bands, but they all overlap and are cailbrated against each
other. I understand that the gamma ray spectrum is unbounded, since
any photon with sufficient energy to knock an electron out of an atom
(ionising radiation) will be detected by a photomultiplier, regardless
of whether it is the photoelectric effect, the Comptom effect or pair
production that is involved. The sub 1Hz spectrum really is
unimportant, as there is no useful energy in a photon whose wavelength
is bigger than the Earth.

We also have a well established theory called blackbody radiation
that gives a distribution of photon energies being emitted from a body
at a given temperature. The sun's distribution fits that perfectly, so
we have sound theoretical reasons why it is not emitting anything
appreciable outside that spectrum.

Obviously, the name blackbody radiator is a misnomer, as it needn't
be black, as in the Sun's case. Another example of a blackbody
radiator is the incandescent lightglobe (when turned on!).

-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au

 Latest project: The Amoeba's Secret 
 (http://www.hpcoders.com.au/AmoebasSecret.html)


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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-23 Thread Alberto G. Corona
That only shows how the mind invent whatever childish explanation that does
not impair the self esteem for the unknown.  That sickness is specially
acute in supposedly intelligent people.
El 18/06/2014 09:24, Russell Standish li...@hpcoders.com.au escribió:

 On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
 
  What is baffling to me is that photosynthesis in algae relies on
  absorption in the red and blue part of the spectrum, but reflects
  the big green part in between??  Why didn't it evolve another
  pigment to capture that in order to live in low light conditions?
 

 The idea I've heard is that the original photosynthesiser absorbed the
 green portion of the spectrum, and then the current photosynthesiser
 came along later, and made use of the remaining bits of the spectrum
 (red+blue), and ultimately outcompeted the earlier photosynthesis
 system.

 I gather the earlier photosynthetic system might still be around - the
 so-called purple bacteria, which use a different photosynthesis process
 producing sulfur, not oxygen.

 This also explain why the atmosphere was not oxygenated until ca 2Gya.

 But it does illustrate the way evolution can get stuck in a local
 optima. And also further evidence that any purported Creator must be
 completely incompetent.

 Cheers

 --


 
 Prof Russell Standish  Phone 0425 253119 (mobile)
 Principal, High Performance Coders
 Visiting Professor of Mathematics  hpco...@hpcoders.com.au
 University of New South Wales  http://www.hpcoders.com.au

  Latest project: The Amoeba's Secret
  (http://www.hpcoders.com.au/AmoebasSecret.html)

 

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-23 Thread Bruno Marchal


On 20 Jun 2014, at 22:51, John Mikes wrote:


They ARE black! Our eyes err. - Without joke:
how about those plants that are not green? do they have a chlorophyl
variation that is not green? or a different photosynth-mechsm?


I think they contain chlorophyl, + other pigments, which plays some  
role in their exploitation of light, but don't know much about this.


Bruno




JM


On Thu, Jun 19, 2014 at 8:15 PM, LizR lizj...@gmail.com wrote:
I have long thought that plants should be black, too, for this  
reason. Anyone know why not?



On 20 June 2014 11:40, 'Chris de Morsella' via Everything List everything-list@googlegroups.com 
 wrote:
Perhaps because the two mechanisms function quite differently and  
apparently evolved independently. But I also sometimes wonder why in  
the many hundreds of millions of years of time that no species has  
found a way to utilize the missing chunk of spectrum.
A perfect plant would have jet black leaves -- and use photons  
across all wavelengths of the spectrum. Then there truly would be  
black forests.

Chris


Bacteriorhodopsin - Boundless Open Textbook

Bacteriorhodopsin - Boundless Open Textbook
Bacteriorhodopsin acts a proton pump, generating cellular energy in  
a manner independent of chlorophyll. Read more about  
bacteriorhodopsin in the Bou...

View on www.boundless.com
Preview by Yahoo

Bacteriorhodopsin acts a proton pump, generating cellular energy in  
a manner independent of chlorophyll.


KEY POINTS

Bacteriorhodopsin is a proton pump found in Archaea, it takes light  
energy and coverts it into chemical energy, ATP, that can be used by  
the cell for cellular functions.
Bacteriorhodopsin forms chains, which contain retinal molecule  
within, it is the retinal molecule that absorbs a photon from light,  
it then changes the confirmation of the nearby Bacteriorhodopsin  
protein, allowing it to act as a proton pump.
While chlorophyll based ATP generation depends on a protein  
gradient, like bacteriorhodopsin, but with striking differences,  
suggesting that phototrophy evolved in bacteria and archaea  
independently of each other.

[snip]
These [bacteriochlorophylls ] also produce a proton gradient, but in  
a quite different and more indirect way involving an electron  
transfer chain consisting of several other proteins. Furthermore,  
chlorophylls are aided in capturing light energy by other pigments  
known as antennas; these are not present in bacteriorhodopsin- 
based systems. Last, chlorophyll-based phototrophy is coupled to  
carbon fixation (the incorporation of carbon dioxide into larger  
organic molecules) and for that reason is photosynthesis, which is  
not true for bacteriorhodopsin-based system.



From: meekerdb meeke...@verizon.net
To: everything-list@googlegroups.com
Sent: Thursday, June 19, 2014 10:51 AM

Subject: Re: Solar power's bright future [ may be brighter thanks  
to us aping the quantum trickery of certain algae (cryptophytes  
specifically)]


On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator must be
completely incompetent.

Evolution always must begin with a preexisting platform -- so to  
speak -- and builds on top of it (in an evolutionary way).


Yes, I'd heard the story about the purple bacteriodopsin that used  
the middle part of the visible spectrum.  But the implication is  
that these bacteria were shading the bacteria or algae that  
developed chlorophyll.  Which might be true, but they've not been  
shading them for the last billion years or so since plants came onto  
the land.  So I don't see it has a local optimum.  There's a big  
chunk of spectrum right there adjacent to the spectrum being used.   
There doesn't seem to be any significant barrier.


Brent

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To post to this 

Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-23 Thread Russell Standish
On Mon, Jun 23, 2014 at 10:23:49AM +0200, Alberto G. Corona  wrote:
 That only shows how the mind invent whatever childish explanation that does
 not impair the self esteem for the unknown.  That sickness is specially
 acute in supposedly intelligent people.

Is that meant to be a Christian apologism? Or a response to my playful
barb against creationism? Or something else. 'splain yerself, laddie!


 El 18/06/2014 09:24, Russell Standish li...@hpcoders.com.au escribió:
 
  On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
  
   What is baffling to me is that photosynthesis in algae relies on
   absorption in the red and blue part of the spectrum, but reflects
   the big green part in between??  Why didn't it evolve another
   pigment to capture that in order to live in low light conditions?
  
 
  The idea I've heard is that the original photosynthesiser absorbed the
  green portion of the spectrum, and then the current photosynthesiser
  came along later, and made use of the remaining bits of the spectrum
  (red+blue), and ultimately outcompeted the earlier photosynthesis
  system.
 
  I gather the earlier photosynthetic system might still be around - the
  so-called purple bacteria, which use a different photosynthesis process
  producing sulfur, not oxygen.
 
  This also explain why the atmosphere was not oxygenated until ca 2Gya.
 
  But it does illustrate the way evolution can get stuck in a local
  optima. And also further evidence that any purported Creator must be
  completely incompetent.
 

-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au

 Latest project: The Amoeba's Secret 
 (http://www.hpcoders.com.au/AmoebasSecret.html)


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RE: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-22 Thread 'Chris de Morsella' via Everything List
 

 

From: everything-list@googlegroups.com 
[mailto:everything-list@googlegroups.com] On Behalf Of John Mikes

 

Dear Chris,

not that your answer sounds a bit vague - I have deeper problems.

 

I can understand your point of view – though I am not quite certain what it is 
either. However basic terms like “black” need to be commonly understood (at 
least to some threshold of shared meaning) in order for a symbolic system that 
employs them to be effective as a means of bridging the gulf from mind to mind.

Not questioning your right to be skeptical, and in fact am appreciative of the 
perspective you bring, but isn’t it also important for there to be broad 
agreement on the meaning of terms?

Cheers,

Chris

 

In my lately (2+decades) absobed agnostic views I find our science a bit 
incomplete as explanatory ideas (with mathematical underlying) upon poorly 
understood (iff...?) phenomena adjusted both into the previous images AND the 
capabilities of our present mentality (previous meaning here: based on an 
inventory of old, explained as well on the basis of the THEN theories we could 
manage). 

I find the dark things (matter, energy, hole) exciting and brilliant. Not 
'real'. 

They serve well in bringing our incomplete theories into a fit (just as the 
'inflation' after the Big Bang etc.).

As a former chemist (1/2c polymer pioneering) I do not believe (my own?) 
molecules of which I derived implemented technologies. They are maybe-s. How 
'bout infinite complexities?

 

Throw in infinite combinations of basic physical constants into the mix of the 
multiverse and what do you get?

How much can the brain contain before triggering whiteout --  total information 
overload inducing sudden mental paralysis? I jest but it truly can become mind 
boggling.

Cheers,

Chris

 

Best regards

 

John M 

 

On Fri, Jun 20, 2014 at 11:37 PM, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:

 

 

From: everything-list@googlegroups.com 
[mailto:everything-list@googlegroups.com] On Behalf Of John Mikes
Sent: Friday, June 20, 2014 1:52 PM
To: everything-list@googlegroups.com


Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]

 

They ARE black! Our eyes err. - Without joke:

how about those plants that are not green? do they have a chlorophyl 

variation that is not green? or a different photosynth-mechsm?

JM

 

Not sure I understand what you are saying – How I have understood the terms -- 
darkness (or black materials as well) is the absence of photons, or for a black 
material the absorption of incident photons.  Plants reflect a large number of 
photons. This glaring (well reflective at least LOL) sub-optimal utilization of 
available spectrum does seem to indicate that this could be the result of a 
local evolutionary optima as Russell suggested. 

My – off the top of my head guess – would be that the genetics and/or the 
molecular machinery of chloroplasts have evolved into this corner and cannot 
back out of this local optimization without breaking the machinery in place 
that is necessary in order to sustain the organism. Even with this sub-optimal 
apparatus green plants have done well for themselves on earth – a life form 
just needs to be good enough to outcompete the alternatives and fill an 
environmental niche (until it meets its match or the edge boundaries of the 
niche in which it has a competitive advantage)

Cheers,

Chris

 

On Thu, Jun 19, 2014 at 8:15 PM, LizR lizj...@gmail.com wrote:

I have long thought that plants should be black, too, for this reason. Anyone 
know why not?

 

On 20 June 2014 11:40, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:

Perhaps because the two mechanisms function quite differently and apparently 
evolved independently. But I also sometimes wonder why in the many hundreds of 
millions of years of time that no species has found a way to utilize the 
missing chunk of spectrum.

A perfect plant would have jet black leaves -- and use photons across all 
wavelengths of the spectrum. Then there truly would be black forests.

Chris

 

 

Bacteriorhodopsin - Boundless Open Textbook 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 



 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 image

 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Bacteriorhodopsin - Boundless Open Textbook

Bacteriorhodopsin acts a proton pump, generating cellular energy in a manner 
independent of chlorophyll. Read more about bacteriorhodopsin in the Bou...




 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 View on www.boundless.com

Preview by Yahoo




 



Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-22 Thread LizR
Is it possible that plants are actually efficient in other parts of the
spectrum that we can't see? Maybe they utilise a lot of infra red and
ultraviolet, and the fact that there is a missed opportunity in visible
green is a relatively insignificant blip?

After all we only see less than one light octave. There's a LOT of EM
radiation out there we can't detect.

Or am I barking up the wrong tree? :-)

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-22 Thread John Mikes
Maybe a BLACK tree? how 'bout barking in humanly non-audible
spectrum-parts of the frequencies? dogs may hear it. How 'bout if your
question touches items beyond our humanly accessible/accessed inventory?
Consider my appreciative reply within those parts.
JM


On Sun, Jun 22, 2014 at 7:19 AM, LizR lizj...@gmail.com wrote:

 Is it possible that plants are actually efficient in other parts of the
 spectrum that we can't see? Maybe they utilise a lot of infra red and
 ultraviolet, and the fact that there is a missed opportunity in visible
 green is a relatively insignificant blip?

 After all we only see less than one light octave. There's a LOT of EM
 radiation out there we can't detect.

 Or am I barking up the wrong tree? :-)

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-22 Thread Russell Standish
On Sun, Jun 22, 2014 at 11:19:24PM +1200, LizR wrote:
 Is it possible that plants are actually efficient in other parts of the
 spectrum that we can't see? Maybe they utilise a lot of infra red and
 ultraviolet, and the fact that there is a missed opportunity in visible
 green is a relatively insignificant blip?
 
 After all we only see less than one light octave. There's a LOT of EM
 radiation out there we can't detect.
 
 Or am I barking up the wrong tree? :-)
 

Not really - the peak of the solar spectrum is yellow light. The IR and UV
portions are relatively small components, and what little there is is further
absorbed by water vapour and the ozone layer respectively.

-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au

 Latest project: The Amoeba's Secret 
 (http://www.hpcoders.com.au/AmoebasSecret.html)


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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-22 Thread LizR
On 23 June 2014 11:29, Russell Standish li...@hpcoders.com.au wrote:

 On Sun, Jun 22, 2014 at 11:19:24PM +1200, LizR wrote:
  Is it possible that plants are actually efficient in other parts of the
  spectrum that we can't see? Maybe they utilise a lot of infra red and
  ultraviolet, and the fact that there is a missed opportunity in visible
  green is a relatively insignificant blip?
 
  After all we only see less than one light octave. There's a LOT of EM
  radiation out there we can't detect.
 
  Or am I barking up the wrong tree? :-)
 

 Not really - the peak of the solar spectrum is yellow light. The IR and UV
 portions are relatively small components, and what little there is is
 further
 absorbed by water vapour and the ozone layer respectively.


That doesn't surprise me. I thought there must be a good evolutionary
reason why most animals, insects, reptiles etc see light in roughly the
visible spectrum, with a few exceptions.

So plants missing out on green IS a mystery, at least to me.

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-21 Thread John Mikes
Dear Chris,
not that your answer sounds a bit vague - I have deeper problems.
In my lately (2+decades) absobed agnostic views I find our science a bit
incomplete as explanatory ideas (with mathematical underlying) upon poorly
understood (iff...?) phenomena adjusted both into the *previous* images AND
the capabilities of our *present* mentality (previous meaning here: based
on an inventory of old, explained as well on the basis of the THEN theories
we could manage).
I find the dark things (matter, energy, hole) exciting and brilliant. Not
'real'.
They serve well in bringing our incomplete theories into a fit (just as the
'inflation' after the Big Bang etc.).
As a former chemist (1/2c polymer pioneering) I do not believe (my own?)
molecules of which I derived implemented technologies. They are maybe-s.
How 'bout infinite complexities?

Best regards

John M


On Fri, Jun 20, 2014 at 11:37 PM, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:





 *From:* everything-list@googlegroups.com [mailto:
 everything-list@googlegroups.com] *On Behalf Of *John Mikes
 *Sent:* Friday, June 20, 2014 1:52 PM
 *To:* everything-list@googlegroups.com

 *Subject:* Re: Solar power's bright future [ may be brighter thanks to
 us aping the quantum trickery of certain algae (cryptophytes specifically)]



 They ARE black! Our eyes err. - Without joke:

 how about those plants that are not green? do they have a chlorophyl

 variation that is not green? or a different photosynth-mechsm?

 JM



 Not sure I understand what you are saying – How I have understood the
 terms -- darkness (or black materials as well) is the absence of photons,
 or for a black material the absorption of incident photons.  Plants reflect
 a large number of photons. This glaring (well reflective at least LOL)
 sub-optimal utilization of available spectrum does seem to indicate that
 this could be the result of a local evolutionary optima as Russell
 suggested.

 My – off the top of my head guess – would be that the genetics and/or the
 molecular machinery of chloroplasts have evolved into this corner and
 cannot back out of this local optimization without breaking the machinery
 in place that is necessary in order to sustain the organism. Even with this
 sub-optimal apparatus green plants have done well for themselves on earth –
 a life form just needs to be good enough to outcompete the alternatives and
 fill an environmental niche (until it meets its match or the edge
 boundaries of the niche in which it has a competitive advantage)

 Cheers,

 Chris



 On Thu, Jun 19, 2014 at 8:15 PM, LizR lizj...@gmail.com wrote:

 I have long thought that plants should be black, too, for this reason.
 Anyone know why not?



 On 20 June 2014 11:40, 'Chris de Morsella' via Everything List 
 everything-list@googlegroups.com wrote:

 Perhaps because the two mechanisms function quite differently and
 apparently evolved independently. But I also sometimes wonder why in the
 many hundreds of millions of years of time that no species has found a way
 to utilize the missing chunk of spectrum.

 A perfect plant would have jet black leaves -- and use photons across all
 wavelengths of the spectrum. Then there truly would be black forests.

 Chris





 Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/

 [image: image]
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/

 Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/

 Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll. Read more about bacteriorhodopsin in the
 Bou...

 View on *www.boundless.com*
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/

 Preview by Yahoo


 *Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll.*
 KEY POINTS

 · Bacteriorhodopsin is a proton pump found in Archaea, it takes light
 energy and coverts it into chemical energy, ATP, that can be used by the
 cell for cellular functions.

 · Bacteriorhodopsin forms chains, which contain retinal molecule
 https://www.boundless.com/definition/molecules/ within, it is the
 retinal molecule that absorbs a photon from light, it then changes the
 confirmation of the nearby Bacteriorhodopsin protein, allowing it to act as
 a proton pump.

 · While chlorophyll based ATP generation depends on a protein gradient,
 like bacteriorhodopsin, but with striking differences, suggesting that
 phototrophy evolved in bacteria
 https://www.boundless.com/definition/bacteria/ and archaea
 independently of each other.

 [snip]

 These [bacteriochlorophylls ] also produce a proton gradient, but in a
 quite different and more indirect way involving an electron transfer chain
 consisting of several 

Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-20 Thread Bruno Marchal


On 18 Jun 2014, at 07:27, meekerdb wrote:


On 6/17/2014 9:36 PM, 'Chris de Morsella' via Everything List wrote:
Pretty neat trick.. using quantum coherence to allow energy from  
captured
sunlight to get to the algae's photosynthesis reaction centers as  
fast as

possible.

Quantum biology: Algae may prove to be key ingredient for organic  
solar

cells

http://www.techtimes.com/articles/8680/20140617/algae-may-prove-key-ingredie
nt-organic-solar-cells.htm


A research team led by Australian scientists says a strange quantum
phenomenon during photosynthesis that allows algae to survive in  
low lights

levels might lead to more efficient organic-based solar cells.

The exact function of the quantum effect known as coherence in  
algae is
unknown, they say, but likely is how they harvest energy from the  
sun at low

light levels.

We studied tiny single-celled algae called cryptophytes that  
thrive in the

bottom of pools of water, or under thick ice, where very little light
reaches them, says senior study author Paul Curmi of the  
University of New

South Wales.


What is baffling to me is that photosynthesis in algae relies on  
absorption in the red and blue part of the spectrum, but reflects  
the big green part in between??  Why didn't it evolve another  
pigment to capture that in order to live in low light conditions?



Interesting question, and ... interesting thread :)

Bruno


http://iridia.ulb.ac.be/~marchal/



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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-20 Thread John Mikes
They ARE black! Our eyes err. - Without joke:
how about those plants that are not green? do they have a chlorophyl
variation that is not green? or a different photosynth-mechsm?
JM


On Thu, Jun 19, 2014 at 8:15 PM, LizR lizj...@gmail.com wrote:

 I have long thought that plants should be black, too, for this reason.
 Anyone know why not?


 On 20 June 2014 11:40, 'Chris de Morsella' via Everything List 
 everything-list@googlegroups.com wrote:

 Perhaps because the two mechanisms function quite differently and
 apparently evolved independently. But I also sometimes wonder why in the
 many hundreds of millions of years of time that no species has found a way
 to utilize the missing chunk of spectrum.
 A perfect plant would have jet black leaves -- and use photons across all
 wavelengths of the spectrum. Then there truly would be black forests.
 Chris


 Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
  [image: image]
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
  Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll. Read more about bacteriorhodopsin in the
 Bou...
  View on www.boundless.com
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
  Preview by Yahoo

  Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll.
  KEY POINTS

- Bacteriorhodopsin is a proton pump found in Archaea, it takes light
energy and coverts it into chemical energy, ATP, that can be used by the
cell for cellular functions.
- Bacteriorhodopsin forms chains, which contain retinal molecule
https://www.boundless.com/definition/molecules/ within, it is the
retinal molecule that absorbs a photon from light, it then changes the
confirmation of the nearby Bacteriorhodopsin protein, allowing it to act 
 as
a proton pump.
- While chlorophyll based ATP generation depends on a protein
gradient, like bacteriorhodopsin, but with striking differences, 
 suggesting
that phototrophy evolved in bacteria
https://www.boundless.com/definition/bacteria/ and archaea
independently of each other.

 [snip]
 These [bacteriochlorophylls ] also produce a proton gradient, but in a
 quite different and more indirect way involving an electron transfer chain
 consisting of several other proteins. Furthermore, chlorophylls are aided
 in capturing light energy by other pigments known as antennas; these are
 not present in bacteriorhodopsin-based systems. Last, chlorophyll-based
 phototrophy is coupled to carbon fixation
 https://www.boundless.com/definition/fixation/ (the incorporation of
 carbon dioxide into larger organic molecules) and for that reason is
 photosynthesis, which is not true for bacteriorhodopsin-based system.


   --
  *From:* meekerdb meeke...@verizon.net
 *To:* everything-list@googlegroups.com
 *Sent:* Thursday, June 19, 2014 10:51 AM

 *Subject:* Re: Solar power's bright future [ may be brighter thanks to
 us aping the quantum trickery of certain algae (cryptophytes specifically)]

 On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

 But it does illustrate the way evolution can get stuck in a local
 optima. And also further evidence that any purported Creator must be
 completely incompetent.

  Evolution always must begin with a preexisting platform -- so to speak
 -- and builds on top of it (in an evolutionary way).


 Yes, I'd heard the story about the purple bacteriodopsin that used the
 middle part of the visible spectrum.  But the implication is that these
 bacteria were shading the bacteria or algae that developed chlorophyll.
 Which might be true, but they've not been shading them for the last billion
 years or so since plants came onto the land.  So I don't see it has a local
 optimum.  There's a big chunk of spectrum right there adjacent to the
 spectrum being used.  There doesn't seem to be any significant barrier.

 Brent

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 To post to this group, send email to 

RE: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-20 Thread 'Chris de Morsella' via Everything List
 

 

From: everything-list@googlegroups.com 
[mailto:everything-list@googlegroups.com] On Behalf Of John Mikes
Sent: Friday, June 20, 2014 1:52 PM
To: everything-list@googlegroups.com
Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]

 

They ARE black! Our eyes err. - Without joke:

how about those plants that are not green? do they have a chlorophyl 

variation that is not green? or a different photosynth-mechsm?

JM

 

Not sure I understand what you are saying – How I have understood the terms -- 
darkness (or black materials as well) is the absence of photons, or for a black 
material the absorption of incident photons.  Plants reflect a large number of 
photons. This glaring (well reflective at least LOL) sub-optimal utilization of 
available spectrum does seem to indicate that this could be the result of a 
local evolutionary optima as Russell suggested. 

My – off the top of my head guess – would be that the genetics and/or the 
molecular machinery of chloroplasts have evolved into this corner and cannot 
back out of this local optimization without breaking the machinery in place 
that is necessary in order to sustain the organism. Even with this sub-optimal 
apparatus green plants have done well for themselves on earth – a life form 
just needs to be good enough to outcompete the alternatives and fill an 
environmental niche (until it meets its match or the edge boundaries of the 
niche in which it has a competitive advantage)

Cheers,

Chris

 

On Thu, Jun 19, 2014 at 8:15 PM, LizR lizj...@gmail.com wrote:

I have long thought that plants should be black, too, for this reason. Anyone 
know why not?

 

On 20 June 2014 11:40, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:

Perhaps because the two mechanisms function quite differently and apparently 
evolved independently. But I also sometimes wonder why in the many hundreds of 
millions of years of time that no species has found a way to utilize the 
missing chunk of spectrum.

A perfect plant would have jet black leaves -- and use photons across all 
wavelengths of the spectrum. Then there truly would be black forests.

Chris

 

 

Bacteriorhodopsin - Boundless Open Textbook 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 



 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 image

 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Bacteriorhodopsin - Boundless Open Textbook

Bacteriorhodopsin acts a proton pump, generating cellular energy in a manner 
independent of chlorophyll. Read more about bacteriorhodopsin in the Bou...




 
https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 View on www.boundless.com

Preview by Yahoo




 


Bacteriorhodopsin acts a proton pump, generating cellular energy in a manner 
independent of chlorophyll.


KEY POINTS


· Bacteriorhodopsin is a proton pump found in Archaea, it takes light energy 
and coverts it into chemical energy, ATP, that can be used by the cell for 
cellular functions.

· Bacteriorhodopsin forms chains, which contain retinal  
https://www.boundless.com/definition/molecules/ molecule within, it is the 
retinal molecule that absorbs a photon from light, it then changes the 
confirmation of the nearby Bacteriorhodopsin protein, allowing it to act as a 
proton pump.

· While chlorophyll based ATP generation depends on a protein gradient, like 
bacteriorhodopsin, but with striking differences, suggesting that phototrophy 
evolved in  https://www.boundless.com/definition/bacteria/ bacteria and 
archaea independently of each other.

[snip]

These [bacteriochlorophylls ] also produce a proton gradient, but in a quite 
different and more indirect way involving an electron transfer chain consisting 
of several other proteins. Furthermore, chlorophylls are aided in capturing 
light energy by other pigments known as antennas; these are not present in 
bacteriorhodopsin-based systems. Last, chlorophyll-based phototrophy is coupled 
to carbon  https://www.boundless.com/definition/fixation/ fixation (the 
incorporation of carbon dioxide into larger organic molecules) and for that 
reason is photosynthesis, which is not true for bacteriorhodopsin-based system. 

 

 

  _  

From: meekerdb meeke...@verizon.net
To: everything-list@googlegroups.com 
Sent: Thursday, June 19, 2014 10:51 AM


Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]

 

On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any 

Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-19 Thread meekerdb

On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator must be
completely incompetent.

Evolution always must begin with a preexisting platform -- so to speak -- and builds on 
top of it (in an evolutionary way).


Yes, I'd heard the story about the purple bacteriodopsin that used the middle part of the 
visible spectrum.  But the implication is that these bacteria were shading the bacteria or 
algae that developed chlorophyll.  Which might be true, but they've not been shading them 
for the last billion years or so since plants came onto the land. So I don't see it has a 
local optimum.  There's a big chunk of spectrum right there adjacent to the spectrum being 
used.  There doesn't seem to be any significant barrier.


Brent

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-19 Thread 'Chris de Morsella' via Everything List
Perhaps because the two mechanisms function quite differently and apparently 
evolved independently. But I also sometimes wonder why in the many hundreds of 
millions of years of time that no species has found a way to utilize the 
missing chunk of spectrum.
A perfect plant would have jet black leaves -- and use photons across all 
wavelengths of the spectrum. Then there truly would be black forests.
Chris


Bacteriorhodopsin - Boundless Open Textbook

 
   Bacteriorhodopsin - Boundless Open Textbook
Bacteriorhodopsin acts a proton pump, generating cellular energy in a manner 
independent of chlorophyll. Read more about bacteriorhodopsin in the Bou...  
View on www.boundless.com Preview by Yahoo  
 
Bacteriorhodopsin acts a proton pump, generating cellular energy in a manner 
independent of chlorophyll.
KEY POINTS
* Bacteriorhodopsin is a proton pump found in Archaea, it takes light 
energy and coverts it into chemical energy, ATP, that can be used by the cell 
for cellular functions.
* Bacteriorhodopsin forms chains, which contain retinal molecule 
within, it is the retinal molecule that absorbs a photon from light, it then 
changes the confirmation of the nearby Bacteriorhodopsin protein, allowing it 
to act as a proton pump.
* While chlorophyll based ATP generation depends on a protein gradient, 
like bacteriorhodopsin, but with striking differences, suggesting that 
phototrophy evolved in bacteria and archaea independently of each other.
[snip]
These [bacteriochlorophylls ] also produce a proton gradient, but in a quite 
different and more indirect way involving an electron transfer chain consisting 
of several other proteins. Furthermore, chlorophylls are aided in capturing 
light energy by other pigments known as antennas; these are not present in 
bacteriorhodopsin-based systems. Last, chlorophyll-based phototrophy is coupled 
to carbon fixation (the incorporation of carbon dioxide into larger organic 
molecules) and for that reason is photosynthesis, which is not true for 
bacteriorhodopsin-based system. 




 From: meekerdb meeke...@verizon.net
To: everything-list@googlegroups.com 
Sent: Thursday, June 19, 2014 10:51 AM
Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]
 


On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator
must be
completely incompetent.


Evolution always must begin with a preexisting platform -- so to speak -- and 
builds on top of it (in an evolutionary way).
Yes, I'd heard the story about the purple bacteriodopsin that used the middle 
part of the visible spectrum.  But the implication is that these bacteria were 
shading the bacteria or algae that developed chlorophyll.  Which might be true, 
but they've not been shading them for the last billion years or so since plants 
came onto the land.  So I don't see it has a local optimum.  There's a big 
chunk of spectrum right there adjacent to the spectrum being used.  There 
doesn't seem to be any significant barrier.

Brent

-- 
You received this message because you are subscribed to the Google Groups 
Everything List group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to everything-list+unsubscr...@googlegroups.com.
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Visit this group at http://groups.google.com/group/everything-list.
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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-19 Thread LizR
I have long thought that plants should be black, too, for this reason.
Anyone know why not?


On 20 June 2014 11:40, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:

 Perhaps because the two mechanisms function quite differently and
 apparently evolved independently. But I also sometimes wonder why in the
 many hundreds of millions of years of time that no species has found a way
 to utilize the missing chunk of spectrum.
 A perfect plant would have jet black leaves -- and use photons across all
 wavelengths of the spectrum. Then there truly would be black forests.
 Chris


 Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 [image: image]
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Bacteriorhodopsin - Boundless Open Textbook
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll. Read more about bacteriorhodopsin in the
 Bou...
 View on www.boundless.com
 https://www.boundless.com/microbiology/microbial-metabolism/phototrophy/bacteriorhodopsin/
 Preview by Yahoo

 Bacteriorhodopsin acts a proton pump, generating cellular energy in a
 manner independent of chlorophyll.
 KEY POINTS

- Bacteriorhodopsin is a proton pump found in Archaea, it takes light
energy and coverts it into chemical energy, ATP, that can be used by the
cell for cellular functions.
- Bacteriorhodopsin forms chains, which contain retinal molecule
https://www.boundless.com/definition/molecules/ within, it is the
retinal molecule that absorbs a photon from light, it then changes the
confirmation of the nearby Bacteriorhodopsin protein, allowing it to act as
a proton pump.
- While chlorophyll based ATP generation depends on a protein
gradient, like bacteriorhodopsin, but with striking differences, suggesting
that phototrophy evolved in bacteria
https://www.boundless.com/definition/bacteria/ and archaea
independently of each other.

 [snip]
 These [bacteriochlorophylls ] also produce a proton gradient, but in a
 quite different and more indirect way involving an electron transfer chain
 consisting of several other proteins. Furthermore, chlorophylls are aided
 in capturing light energy by other pigments known as antennas; these are
 not present in bacteriorhodopsin-based systems. Last, chlorophyll-based
 phototrophy is coupled to carbon fixation
 https://www.boundless.com/definition/fixation/ (the incorporation of
 carbon dioxide into larger organic molecules) and for that reason is
 photosynthesis, which is not true for bacteriorhodopsin-based system.


   --
  *From:* meekerdb meeke...@verizon.net
 *To:* everything-list@googlegroups.com
 *Sent:* Thursday, June 19, 2014 10:51 AM

 *Subject:* Re: Solar power's bright future [ may be brighter thanks to
 us aping the quantum trickery of certain algae (cryptophytes specifically)]

 On 6/18/2014 3:15 PM, 'Chris de Morsella' via Everything List wrote:

 But it does illustrate the way evolution can get stuck in a local
 optima. And also further evidence that any purported Creator must be
 completely incompetent.

  Evolution always must begin with a preexisting platform -- so to speak
 -- and builds on top of it (in an evolutionary way).


 Yes, I'd heard the story about the purple bacteriodopsin that used the
 middle part of the visible spectrum.  But the implication is that these
 bacteria were shading the bacteria or algae that developed chlorophyll.
 Which might be true, but they've not been shading them for the last billion
 years or so since plants came onto the land.  So I don't see it has a local
 optimum.  There's a big chunk of spectrum right there adjacent to the
 spectrum being used.  There doesn't seem to be any significant barrier.

 Brent

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-18 Thread Russell Standish
On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
 
 What is baffling to me is that photosynthesis in algae relies on
 absorption in the red and blue part of the spectrum, but reflects
 the big green part in between??  Why didn't it evolve another
 pigment to capture that in order to live in low light conditions?
 

The idea I've heard is that the original photosynthesiser absorbed the
green portion of the spectrum, and then the current photosynthesiser
came along later, and made use of the remaining bits of the spectrum
(red+blue), and ultimately outcompeted the earlier photosynthesis
system.

I gather the earlier photosynthetic system might still be around - the
so-called purple bacteria, which use a different photosynthesis process
producing sulfur, not oxygen.

This also explain why the atmosphere was not oxygenated until ca 2Gya.

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator must be
completely incompetent.

Cheers

-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au

 Latest project: The Amoeba's Secret 
 (http://www.hpcoders.com.au/AmoebasSecret.html)


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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-18 Thread LizR
I suppose the Sun's spectral characteristics might have changed a bit since
chlorophyll evolved - though I wouldn't think *that* much. However, I agree
with Brent - I would think that any plant that evolved the ability to
absorb green light (not to mention infra red and all the other EM radiation
knocking around) would have a distinct advantage over the current lot, and
like Ice 9 the situation is surely unstable against something wandering
into that part of the genetic landscape. But having no knowledge of
biochemistry and suchlike I have no idea how likely that is.


On 18 June 2014 19:31, Russell Standish li...@hpcoders.com.au wrote:

 On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
 
  What is baffling to me is that photosynthesis in algae relies on
  absorption in the red and blue part of the spectrum, but reflects
  the big green part in between??  Why didn't it evolve another
  pigment to capture that in order to live in low light conditions?
 

 The idea I've heard is that the original photosynthesiser absorbed the
 green portion of the spectrum, and then the current photosynthesiser
 came along later, and made use of the remaining bits of the spectrum
 (red+blue), and ultimately outcompeted the earlier photosynthesis
 system.

 I gather the earlier photosynthetic system might still be around - the
 so-called purple bacteria, which use a different photosynthesis process
 producing sulfur, not oxygen.

 This also explain why the atmosphere was not oxygenated until ca 2Gya.

 But it does illustrate the way evolution can get stuck in a local
 optima. And also further evidence that any purported Creator must be
 completely incompetent.

 Cheers

 --


 
 Prof Russell Standish  Phone 0425 253119 (mobile)
 Principal, High Performance Coders
 Visiting Professor of Mathematics  hpco...@hpcoders.com.au
 University of New South Wales  http://www.hpcoders.com.au

  Latest project: The Amoeba's Secret
  (http://www.hpcoders.com.au/AmoebasSecret.html)

 

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-18 Thread Russell Standish
On Wed, Jun 18, 2014 at 09:06:00PM +1200, LizR wrote:
 I suppose the Sun's spectral characteristics might have changed a bit since
 chlorophyll evolved - though I wouldn't think *that* much. However, I agree
 with Brent - I would think that any plant that evolved the ability to
 absorb green light (not to mention infra red and all the other EM radiation
 knocking around) would have a distinct advantage over the current lot, and
 like Ice 9 the situation is surely unstable against something wandering
 into that part of the genetic landscape. But having no knowledge of
 biochemistry and suchlike I have no idea how likely that is.
 

I guess its rather unlikely, given that photosynthesis evolved twice
in 4 billion years, with the last time poisoning the atmosphere
causing a massive extinction event that has not been seen since.



-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au

 Latest project: The Amoeba's Secret 
 (http://www.hpcoders.com.au/AmoebasSecret.html)


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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-18 Thread 'Chris de Morsella' via Everything List





 From: Russell Standish li...@hpcoders.com.au
To: everything-list@googlegroups.com 
Sent: Wednesday, June 18, 2014 12:31 AM
Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]
 

On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
 
 What is baffling to me is that photosynthesis in algae relies on
 absorption in the red and blue part of the spectrum, but reflects
 the big green part in between??  Why didn't it evolve another
 pigment to capture that in order to live in low light conditions?
 

The idea I've heard is that the original photosynthesiser absorbed the
green portion of the spectrum, and then the current photosynthesiser
came along later, and made use of the remaining bits of the spectrum
(red+blue), and ultimately outcompeted the earlier photosynthesis
system.

Interesting! Did not hear about this hypothesis... so thanks for sharing. I 
have also wondered why the green spectrum is not being used in photosynthesis.

I gather the earlier photosynthetic system might still be around - the
so-called purple bacteria, which use a different photosynthesis process
producing sulfur, not oxygen.

This also explain why the atmosphere was not oxygenated until ca 2Gya.

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator must be
completely incompetent.

Evolution always must begin with a preexisting platform -- so to speak -- and 
builds on top of it (in an evolutionary way). Take the human brain as an 
example. We remain stuck with the (local optima) of our reptilian brains for 
example, and much of our functioning is still centered in these ancient parts 
of our brain. Evolution needs to live with what it got and build upon it 
and human brain anatomy tells this story of hundreds of millions of years of 
tinkering, adapting and adding new systems on top of older preexisting systems 
(as opposed to radical from the ground up re-building).

Cheers,
Chris


Cheers

-- 


Prof Russell Standish                  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics      hpco...@hpcoders.com.au
University of New South Wales          http://www.hpcoders.com.au

Latest project: The Amoeba's Secret 
         (http://www.hpcoders.com.au/AmoebasSecret.html)





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RE: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-18 Thread 'Chris de Morsella' via Everything List
 

 

From: everything-list@googlegroups.com 
[mailto:everything-list@googlegroups.com] On Behalf Of LizR
Sent: Wednesday, June 18, 2014 3:45 PM
To: everything-list@googlegroups.com
Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]

 

This geezer seems to think solar is good to go...

http://readersupportednews.org/opinion2/277-75/24317-the-turning-point-new-hope-for-the-climate



Liz – the numbers clearly show that not only is solar good to go; it is going. 
Global installed capacity is growing at a very rapid rate; per unit costs will 
continue to come down (and in some favorable areas it is already becoming the 
low cost supply). 

Solar PV is very much of a knowledge industry and benefits from a Moore’s Law 
type of geometric growth (and fall in per unit price as well). There are some 
significant potential solar PV revolutions on the near horizon too. For example 
solar cells that harvest in more of the bandwidths of the spectrum including 
down into the infrared as well (they would continue to produce some power even 
when covered by light cloud cover) – such layered cells (tuned to different 
band gaps) could harvest a greater portion of the solar flux.

Solar technology (across various orthogonal dimensions) is advancing and 
rapidly so – driven by the same congruence of technologies that is also driving 
informatics. Compare the speed of evolution of solar PV technology and 
techniques with say the rate of technological change in the coal sector. One is 
moving very fast the other by comparison is sitting still.

The scales are tipping; the era of fossil energy is drawing to a close… and 
sooner than most people realize. 

Chris

 

 

 

On 19 June 2014 10:15, 'Chris de Morsella' via Everything List 
everything-list@googlegroups.com wrote:

 

 

  _  

From: Russell Standish li...@hpcoders.com.au
To: everything-list@googlegroups.com 
Sent: Wednesday, June 18, 2014 12:31 AM
Subject: Re: Solar power's bright future [ may be brighter thanks to us aping 
the quantum trickery of certain algae (cryptophytes specifically)]


On Tue, Jun 17, 2014 at 10:27:48PM -0700, meekerdb wrote:
 
 What is baffling to me is that photosynthesis in algae relies on
 absorption in the red and blue part of the spectrum, but reflects
 the big green part in between??  Why didn't it evolve another
 pigment to capture that in order to live in low light conditions?
 

The idea I've heard is that the original photosynthesiser absorbed the
green portion of the spectrum, and then the current photosynthesiser
came along later, and made use of the remaining bits of the spectrum
(red+blue), and ultimately outcompeted the earlier photosynthesis
system.

 

Interesting! Did not hear about this hypothesis... so thanks for sharing. I 
have also wondered why the green spectrum is not being used in photosynthesis.



I gather the earlier photosynthetic system might still be around - the
so-called purple bacteria, which use a different photosynthesis process
producing sulfur, not oxygen.

This also explain why the atmosphere was not oxygenated until ca 2Gya.

But it does illustrate the way evolution can get stuck in a local
optima. And also further evidence that any purported Creator must be
completely incompetent.

 

Evolution always must begin with a preexisting platform -- so to speak -- and 
builds on top of it (in an evolutionary way). Take the human brain as an 
example. We remain stuck with the (local optima) of our reptilian brains for 
example, and much of our functioning is still centered in these ancient parts 
of our brain. Evolution needs to live with what it got and build upon it 
and human brain anatomy tells this story of hundreds of millions of years of 
tinkering, adapting and adding new systems on top of older preexisting systems 
(as opposed to radical from the ground up re-building).

 

Cheers,

Chris



Cheers

-- 


Prof Russell Standish  Phone 0425 253119 (mobile)
Principal, High Performance Coders
Visiting Professor of Mathematics  hpco...@hpcoders.com.au
University of New South Wales  http://www.hpcoders.com.au 
http://www.hpcoders.com.au/ 

Latest project: The Amoeba's Secret 
(http://www.hpcoders.com.au/AmoebasSecret.html)

 




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RE: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-17 Thread 'Chris de Morsella' via Everything List
Pretty neat trick.. using quantum coherence to allow energy from captured
sunlight to get to the algae's photosynthesis reaction centers as fast as
possible.  

Quantum biology: Algae may prove to be key ingredient for organic solar
cells

http://www.techtimes.com/articles/8680/20140617/algae-may-prove-key-ingredie
nt-organic-solar-cells.htm


A research team led by Australian scientists says a strange quantum
phenomenon during photosynthesis that allows algae to survive in low lights
levels might lead to more efficient organic-based solar cells.

The exact function of the quantum effect known as coherence in algae is
unknown, they say, but likely is how they harvest energy from the sun at low
light levels.

We studied tiny single-celled algae called cryptophytes that thrive in the
bottom of pools of water, or under thick ice, where very little light
reaches them, says senior study author Paul Curmi of the University of New
South Wales.

While the light-harvesting method of most such types of algae displays
quantum coherence, a genetic mutation altering a light-harvesting type of
protein in some algae causes it to be switched off, the researchers found.

The finding will allow the study of the role quantum coherence plays in
photosynthesis by comparing algae with and without those proteins, Curmi
said.

In the often baffling realm of quantum physics, systems deemed to be
coherent -- having all their quantum waves moving in step - can exist in
different states at the same time, an effect called superposition, the
researchers said.

The assumption is that this could increase the efficiency of
photosynthesis, allowing the algae and bacteria to exist on almost no
light, Curmi said.

The assumption is that quantum coherence allows energy from captured
sunlight to get to the algae's photosynthesis reaction centers as fast as
possible, he said.

It was assumed the energy gets to the reaction [center] in a random
fashion, like a drunk staggering home, Curmi said. But quantum coherence
would allow the energy to test every possible pathway simultaneously before
travelling via the quickest route.

The researchers said they utilized X-ray crystallography in order to analyze
the structure of light-harvesting centers in three species of algae.

All showed the genetic mutation that changed proteins and affected
coherence, they said.

This shows cryptophytes have evolved an elegant but powerful genetic switch
to control coherence and change the mechanisms used for light harvesting,
Curmi said.

In addition to possible pointing the way to better and more efficient
organic solar cells, the finding could lead to a new class of quantum-based
electronic devices, the researchers said.

Their next step, the researchers said, would be to analyze and compare
different cryptophytes inhabiting different environmental niche to see if
the quantum coherence effect is a factor in their survival.

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Re: Solar power's bright future [ may be brighter thanks to us aping the quantum trickery of certain algae (cryptophytes specifically)]

2014-06-17 Thread meekerdb

On 6/17/2014 9:36 PM, 'Chris de Morsella' via Everything List wrote:

Pretty neat trick.. using quantum coherence to allow energy from captured
sunlight to get to the algae's photosynthesis reaction centers as fast as
possible.

Quantum biology: Algae may prove to be key ingredient for organic solar
cells

http://www.techtimes.com/articles/8680/20140617/algae-may-prove-key-ingredie
nt-organic-solar-cells.htm


A research team led by Australian scientists says a strange quantum
phenomenon during photosynthesis that allows algae to survive in low lights
levels might lead to more efficient organic-based solar cells.

The exact function of the quantum effect known as coherence in algae is
unknown, they say, but likely is how they harvest energy from the sun at low
light levels.

We studied tiny single-celled algae called cryptophytes that thrive in the
bottom of pools of water, or under thick ice, where very little light
reaches them, says senior study author Paul Curmi of the University of New
South Wales.


What is baffling to me is that photosynthesis in algae relies on absorption in the red and 
blue part of the spectrum, but reflects the big green part in between??  Why didn't it 
evolve another pigment to capture that in order to live in low light conditions?


Brent

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