Hmmer,Hmmer2 autopkgtests [GSOC]

Hi everyone, I made these two packages compatible with continous integration. But now i have a problem these packages in SVN i don't know how can i upload packages can someone help me please .Thank you all. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about

Re: Exonerate Test Failures

"Could not open list for removal [%s]", remove_path); } Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-06-08 17:25 GMT+03:

Re: Hmmer,Hmmer2 autopkgtests [GSOC]

Hi all, I am waiting for these packages to transfer git . Thanks for your help. Best Regards Canberk Koç www.about.me/canberkkoc 13 Haz 2016 12:40 tarihinde "merlettaia" <merlett...@gmail.com> yazdı: > Hi Canberk, > The main difference between git and svn - svn alway

Re: Exonerate Test Failures

Hello Andreas, Due to my final exams i'll be passive to 8 June when if it will be a problem i try to do work also patches. İf it's not it will be very good for me . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_sou

MOM information

Hello Andreas, One of my friend saw i'm working on exonerate and i mentioned him about MOM event. He'll send an introduction mail. He asked me how is MOM works and what he must to do work in it. Can you help me on this . Thanks. Best Regards Canberk Koç [image: https://]about.me/canberkkoc

Re: Exonerate Test Failures

i'll gather all together and turn back to you. Best regards Canberk Koç www.about.me/canberkkoc 26 May 2016 12:50 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > since you did not sent any answer I assume the hints were helpful > enough. Is th

Re: Infernal Autopkgtest

Hello Andreas, I upload to git infernal thank you for help. I also make a pkgsuite to Ffindex but i think program have a problem it can't allocate field for working i try manually . If you want to i can upload it to git but this package also in SVN . Best Regards Canberk Koç [image: https

Re: Hmmer,Hmmer2 autopkgtests [GSOC]

Hello all, I upload packages.Thank you for your help. Best Regards Canberk Koç www.about.me/canberkkoc 16 Haz 2016 19:23 tarihinde "Canberk Koç" <canberk...@gmail.com> yazdı: > Hello Afif, > > Thanks for your help . I'll commit packages tonight. > > Best Regar

Re: Hmmer,Hmmer2 autopkgtests [GSOC]

Hello Andreas, I mean i upload to git :-) Sorr for misunderstanding thanks for your help. Best Regards Canberk Koç www.about.me/canberkkoc 21 Haz 2016 16:30 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > On Fri, Jun 17, 2016 at 09:57:55PM +0300,

Re: Exonerate Test Failures

) But PATH works STDIN dont. Best regards Canberk Koç www.about.me/canberkkoc 21 Haz 2016 14:43 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > thanks for checking. Unfortunately I do not really understand what you > want to express. You quoted a section

Re: Midterm Evaluation [GSOC]

Hi Andreas, No problem for me 3 gone 7 to go then i keep on working thanks for help. I hope i will manage this by 27 june . Best Regards Canberk Koç www.about.me/canberkkoc 20 Haz 2016 13:58 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > On M

Infernal Autopkgtest

Hello All, I make a autopkgtest suite for Infernal can somebody move the package to git. Thanks for your help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: Hmmer,Hmmer2 autopkgtests [GSOC]

Hello Afif, Thanks for your help . I'll commit packages tonight. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-06-15 10:55 GMT+03:00 Afif Elghraoui <a...@d

Muscle Autopkgtest

Hello all, I want to ask you something it will clear my mind i think, in Muscle there is no testsuite in that case i must write tests and what should i consider important. Thank you . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?pr

Re: Suspicious output in test (Was: [ffindex] 01/01: Autopkgtest suite added with allocation error])

Hi Andreas, I forget to use -s parameter for ffindex_build i'll fix it today. İt gives allocation error as i said before in my testbed. Best Regards Canberk Koç www.about.me/canberkkoc 24 Haz 2016 10:23 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: Hi Canberk, if I ru

BWA

Hello Andreas, I upload autopkgtest to git for bwa. Thanks for your help. Best Regards Canberk Koç www.about.me/canberkkoc

Re: Suspicious output in test (Was: [ffindex] 01/01: Autopkgtest suite added with allocation error])

Hello Andreas, It is remain unsolved it gives same error at build time also.I relook at it and give you a feedback by evening. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_li

Re: Primer3

Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-06-28 10:36 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > Hi Canberk, > > On Mon, Jun 27, 2016 at 10:25:40AM +03

Re: Primer3

Hello Andreas, I must go to hospital due to an emergency situation. Now i'll look for clean up these files. Best Regards Canberk Koç www.about.me/canberkkoc 26 Haz 2016 15:12 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > On Sun, Jun 26, 2016 at 09:40:09AM +0300

Re: Primer3

Hello Andreas, I manage to finish fixes can you control them please . If i do something wrong i work on it immediately. Thanks for guidence and help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Re: GSOC [Continuous Integration for all biological applications inside Debian]

-04-07 9:32 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > Hi Canberk, > > On Thu, Apr 07, 2016 at 04:42:56AM +0300, Canberk Koç wrote: > > >[I think I gave a warning that non-private messages will be answered on > > >the mailing list and I hereby doing so

Re: GSOC [Continuous Integration for all biological applications inside Debian]

; > On Wed, Apr 06, 2016 at 02:30:36AM +0300, Canberk Koç wrote: > > I made a test suite for exonerate package but i dont know how to deliver > it > > to you. > > Simply commit to Git. > > > I made it , took example from CI( Biosquid package) and made some > &g

GSOC [Continuous Integration for all biological applications inside Debian]

this project. Already forgive my silly questions thanks to all :) Regards. -- [image: --] Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: GSOC [Continuous Integration for all biological applications inside Debian]

22, 2016 at 02:59:50PM +0200, Canberk Koç wrote: > > My name is Canberk i am 3. grade computer engineering student from > > Çanakkale Onsekiz Mart University/Türkiye. > > I interested in your project in GSOC. > > Thanks for your introduction and your interest i

Re: GSOC [Continuous Integration for all biological applications inside Debian]

ndr...@an3as.eu>: > Hi Canberk, > > On Wed, Mar 23, 2016 at 12:01:30AM +0200, Canberk Koç wrote: > > I have to give you a little update i'm reading policy, join alioth page > and > > have no problem in that subject but > > Fine. :-) > > > i have a problem on packag

Bonding Stage

Hello Andreas, Thank you for picking me for GSoC candidate firstly. Now what are we doing in this stage. I read from GSoC's page but i already do introduction etc. Best Regards [image: --] Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_sou

Re: GSoC Update

Hello Tanya, I don't mind anything like that. Our goal is done our work well so i'll look your list and choose packages with considering conflictions. Best Regards Canberk Koç www.about.me/canberkkoc 21 May 2016 10:38 tarihinde "Michael Banck" <mba...@debian.org> yazdı: Hi,

Exonerate Test Failures

h test OK # look for IDs which are missing run_fastafetch A_MISSING_FROM_START 1 run_fastafetch M_MISSING_FROM_MIDDLE 1 run_fastafetch z_MISSING_FROM_END 1 // UPPER FAİLS COMES FROM HERE BUT FETCHİNG WORKS Best Regards -- Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canb

GSoC Update

Hello Andreas, I changed the project abstract in the GSoC page to make it more easy to understand for everyone. If you want to look here is https://summerofcode.withgoogle.com/projects/#4737187635527680 link of it if i wrote anything wrong i can change immediately. Best Regards -- Canberk

Re: GSoC Update

Hi again , I update abstract again thank you for your interest. Best Regards 2016-05-11 9:36 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > Hi Canberk, > > On Wed, May 11, 2016 at 02:37:45AM +0300, Canberk Koç wrote: > > Hello Andreas, > > > > I changed the

Help for Bugs

Hi everyone, I'm in bonding stage for GSoC and decide to look, try to solve bugs at this stage but i cannot manage to find where our bugs listed. Can anybody help me sorry for bothering you. Best Regards -- Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?pr

Re: Last call for GSoC intern selection!

interest on the mailing list where we are coordinating this > project[1] (list in CC): > > Name Number of tests just provided > Anna Lioznova <lanna2...@gmail.com> 0 > Canberk Koç <canberk...@gmail.com> 1

Clustalo Autopkgtests

Hello Andreas, I commit to git. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: GDPC Autopkgtes [GSOC]

Hello Andreas,Sascha, Thanks for your help first of all. I can't look what you've changed in mummer but i'll look it by tommorrow and i will give you more detailed report. I am going on list also ;-) Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberk

Re: [GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Hello Andreas, I will but i combine the examples myself most of the time so there is no copyright of them. What should i write for them ? Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campa

Re: GDPC Autopkgtes [GSOC]

or what we'll going to do about it . Thanks for help i am moving on from list. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-07-23 22:10 GMT+03:00 Andreas Tille

Re: GDPC Autopkgtes [GSOC]

Hello Andreas, I write that (environment variable) for a presentation :) I use correct one in tests. I will look the code again if i can manage i'll inform you again. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_sou

Re: GDPC Autopkgtes [GSOC]

is broken. Work after GSOC issue i am eager to work too . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-07-24 9:13 GMT+03:00 Andreas Tille <andr...@fam-tille.d

Phylip Autopkgtest [GSOC]

Hello Andreas, I make a autopkgtestsuite for phylip but package in svn can you please move it to git .Thanks for help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: [GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Hello Andreas, I made up probcons test i have a little problem about it and figured out what is it (typo) :-) I'll commit it today. Start to look blast+. Best Regards Canberk Koç www.about.me/canberkkoc 29 Tem 2016 11:04 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı:

Re: [GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Hello Andreas, I commit fastqc and kalign to git . Probcons not in git can you move it to git please . Thanks for help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: [GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Hello Andreas, I work like finishing 3 packages and do commit will i should commit daily ? İf you want like that i can do it no problem :-) Best Regards Canberk Koç www.about.me/canberkkoc 27 Tem 2016 09:36 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: Hi Canberk, On W

Re: [GSoC] any success with ncbi-blast+?

Hello Andreas, I commit Blast+. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-02 9:24 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > Hi Canberk >

Re: [GSoC] any success with ncbi-blast+?

Hello Andreas, I prepare amap-align but package not in git can you please move it to git. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-02 13:50 GMT+03:00 C

Re: [GSoC] ncbi-blast+ and htslib uploaded

Hello Andreas, I am working on ncbi-tools6 as you know it is a toolbox and take some time i'll inform you if i stuck somewhere. Thanks for your help . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Re: [GSOC] Todo List

Hello Andreas, I commit cd-hit fixes . Go on tools6 . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-13 1:31 GMT+03:00 Canberk Koç <canberk...@gmail.com&g

[GSOC] Todo List

I am going on :-) Best Regards. Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: [GSoC] ncbi-blast+ and htslib uploaded

Hello Andreas, I commit Cd-Hit according to it's manual but these example codes did not work also there is no command like cd-hit when i install the program. So as you say i commit it with errors in test so we can figure it our together . Best Regards Canberk Koç [image: https://]about.me

Re: [GSoC] ncbi-blast+ and htslib uploaded

Hello Andreas, I make a suit for tigr-glimmer but package in SVN can you please move it to git. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-11 8:10 GMT

Re: Clustalo Autopkgtests

Hello Andreas, My graphic card is burned and i must send my computer to technical service. I will take my friends computer tonight. Dialign is ok . I work on clustalw and phymol i will commit these set at weekend.Thanks for your help . Best Regards Canberk Koç [image: https://]about.me

Re: Primer3

Hello Andreas, Thanks for trusting me,guidance and give pass. I'm researching for muscle actually but i think contacting to upstream is a more effective way so if i can't figure what should i do i will do it . I start to work on packages now. Best Regards Canberk Koç [image: https

Muscle Tests

muscle. At this point i need your help can you give me any advice about what should i test or if you have any tests which i should use for testing muscle.Thanks for your help already. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_s

Daily Report[28.06.16] [GSOC]

-04/msg23449.html> . For gdpc we have attemp to unlock mutex that was not locked issue about GTK i think there is a recipe in program to test i can use but there is problems what we should do . Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_s

Re: [GSoC] ncbi-blast+ and htslib uploaded

Hello Andreas, I'll gladly do tests and keep going before end of the year i think we can manage to cover most of packages. Tools6 issue i'll make partial test to blast2 and binaries packages in it if i stuck i'll inform you again i am going on. Thanks for help. Best Regards Canberk Koç [image

Re: [GSoC] amap-align uploaded

have any suggestions ? It is overlevel for me i think. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-05 12:07 GMT+03:00 Andreas Tille <andr...@an3as.eu>

Re: Phylip Autopkgtest [GSOC]

Hello Andreas, I'll keep that in mind thank you. Best Regards Canberk Koç www.about.me/canberkkoc 22 Tem 2016 10:47 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > On Fri, Jul 22, 2016 at 04:54:42AM +0300, Canberk Koç wrote: > > I mak

GDPC Autopkgtes [GSOC]

Hello Andres, Gdpc in svn can you move it to git please. And i have a problem i found test case in readme file but it gives segmentation fault what should i do. Programmers recipe is not working does it mean something wrong with program. Best Regards Canberk Koç [image: https://]about.me

Re: [GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Hello Andreas, I commit probcons :-) Move on blast+. Best Regards Canberk Koç www.about.me/canberkkoc 29 Tem 2016 16:08 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > On Fri, Jul 29, 2016 at 12:46:31PM +0300, Canberk Koç wrote: > >

Daily Report [29.06.16] [GSOC]

there is a license in it but then i don't know what to do. I work on mentioned packages then. If i can manage a proper connection i will give report too. Thanks for help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Re: Perprimer quilt patch issue

:-) Thanks for help Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-07-02 8:49 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > Hi Canberk > > On Sat, Jul 02, 201

Vcftools autopkgtest

Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: Daily Report [29.06.16] [GSOC]

Hello Andreas, Also last week we look 6 packages visual ones too in that case what we will do ? Best Regards Canberk Koç www.about.me/canberkkoc 4 Tem 2016 12:27 tarihinde "Canberk Koç" <canberk...@gmail.com> yazdı: > Hello Andreas, > > I am going on to work. But this

Perprimer quilt patch issue

to a doc fail output files dont match program outputs but i can't solve it. I will send autopkgtest with comment line before failing test for begining is it a good approach ? Sorry i can't write sooner i get proper connection now. Best Regards Canberk Koç [image: https://]about.me/canberkkoc

Re: [GSOC] Todo List

Hi Andreas, I am working on tools6 i will commit it by tommorow. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-17 10:52 GMT+03:00 Andreas Tille <andr...

Re: Help needed for course lecture about Debian packaging

Hello all again, We do it like what you said but we want to be sure it is the right way. Thank you all for help. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2017-02

Re: [GSOC] Todo List

Hello Andreas, I'll commit a test for tools6 but there is a problem ncbi-tools6 not come from apt-get install so test broke . There is 2 package i have blast2 and tools-bin i made tests for them but i cannot make it work can you look at it . Thanks for help. Canberk Koç [image: https

Re: [GSOC] Todo List

Hello Andreas, I make testsuite for maq but package in SVN can you please move it to git . Thanks for help . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-20

Re: Could somebody please check ncbi-tools6 (Was: [GSOC] Todo List)

Hello , Main problem is package dont provide a binary named ncbi-tools6 :) There are different binaries inherited from this package like blast2 and ncbi-tools-bin so my test must work on two binaries from ncbi-tools6 package . Am i clear now ? Best Regards Canberk Koç [image: https

Re: [GSoC] Phyml test issues

Hello Andreas, I will keep that in mind. I'll be passive for a few days than i'll go on work. Best Regards. Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-24 10:00 GMT

Re: Could somebody please check ncbi-tools6 (Was: [GSOC] Todo List)

Hello all, I think ı use the approach which fit situation .-) Thanks for your help really . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-08-23 1:56 GMT+03:00

Re: [GSoC] Phyml test issues

Hello Andreas, I came back home from hospital today i am not able to look anything right now. I have an medical operation when i get better i'll look. Best Regards. Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Re: [GSOC] Todo List

Hello Andreas, I have a problem with debian due to my graphic card (gtx 970) i try to solve it sorry for delay i will inform you when i figure out . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

GSOC Final Evaluation

Hi Andreas, I made last evaluation here is the link if anyone want to look . https://docs.google.com/document/d/1LBj4Ys39_gxTVwLx8iJGJ8bqB_hCUG0qvQYFq9_-v0M/edit?usp=sharing Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Macsyfinder Test Issues

is a DEF directory in /usr/share i think developer gave path wrong. Is anybody came across something like that or this program have a bug ? Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campa

Sim4 Autopkgtest

Hello Andreas, I make a test and commit to git for Sİm4 can you check it please. Also i want to ask how can i automatically make a README.source file i can't find it. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_sou

Re: [GSoC] Phyml test issues

Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-10-10 22:12 GMT+03:00 Canberk Koç <canberk...@gmail.com>: > Hello Andreas, > > I am about to mail to you i will look it tomorrow

Re: [GSoC] Phyml test issues

Hello Andreas, I made some changes and commit phyml. Test seems to give pass now can you please check it. I will send some information to developer tomorrow. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_med

Njplot Autopkgtest

Hi Andreas, I commit a tes for njplot can you look at it . It is a visual tool so i use a command to create a .ps file and control file type to be sure it is working. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_sou

Dialign-t git transfer issue

Hello Andreas, I start to work on Dİalign-t test but package on SVN can somebody transfer it to Git please. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links>

Re: Macsyfinder Test Issues

Hello Andreas, I commit autopkgtest can you check . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-12-12 18:42 GMT+03:00 Canberk Koç <canberk...@gmail.com>

Re: Macsyfinder Test Issues

Andreas. > > On Thu, Dec 01, 2016 at 08:46:15PM +0300, Canberk Koç wrote: > > Hello Andreas, > > > > Due to my exams i can not find any time to look this issue i will take > care > > of it and return to you. > > > > Best Regards > > >

Re: Updated todo list for autopkgtest (Was: Macsyfinder Test Issues)

Hello Andreas, We are all busy with finishing projects and lecture projects we try to give some time to work we'll do what we can do best . Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campa

Re: Macsyfinder Test Issues

Indeed mentor indeed :) Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016-12-12 14:23 GMT+03:00 Andreas Tille <andr...@an3as.eu>: > On Mon, Dec 12, 2016 at 01:55:06PM +03

Re: Macsyfinder Test Issues

Hello Andreas, Due to my exams i can not find any time to look this issue i will take care of it and return to you. Best Regards Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2016

Re: Outreachy 2017 (Round 14)

Hello Andreas, I was working on filo and find out something. Filo binaries goes to /usr/lib/filo section and i think it is wrong . They make these changes because binary names are too generic should i make link them to bin directory with filo-* like name ? Best Regards Canberk Koç [image

Re: GSoC project: Quality assurance for biological applications inside Debian

Hello again, Rules gives permission then i try again thanks. Regards 6 Mar 2017 18:21 tarihinde "Andreas Tille" <andr...@an3as.eu> yazdı: > Hi Canberk, > > On Mon, Mar 06, 2017 at 05:57:45PM +0300, Canberk Koç wrote: > > Can i apply again  > > I

Re: GSoC project: Quality assurance for biological applications inside Debian

Hello Andreas, Can i apply again  6 Mar 2017 17:22 tarihinde "Andreas Tille" yazdı: > Hi, > > I've just registered a project > > https://wiki.debian.org/SummerOfCode2017/Projects/QA_BiologyApps > > Co-mentors as well as students are welcome. > > Kind regards > >

Re: GSoC project: Quality assurance for biological applications inside Debian

Bad news for us . Canberk Koç [image: https://]about.me/canberkkoc <https://about.me/canberkkoc?promo=email_sig_source=email_sig_medium=email_sig_campaign=external_links> 2017-03-06 18:45 GMT+03:00 Mattia Rizzolo <mat...@debian.org>: > Except that Debian is not partecipating in