October 25, 2011 Galaxy Development News Brief
This release:
http://galaxyproject.org/wiki/News%20Briefs/2011_10_25
Release history:
http://galaxyproject.org/wiki/News%20Briefs
Source: http://getgalaxy.org
new: % hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade: % hg pull -u
When first running Galaxy there are a number of files that are created
including universe_wsgi.ini. After doing an 'hg pull -u' the sample version
of this file will be updated but not the specific server instance of the
file that was initially created.
I was wondering if there are any other files
Excerpts from Fayyaz ul Amir Afsar Minhas's message of 2011-10-25 02:31:30
+:
> I am using Galaxy to align short reads of length 75 from A. Thaliana (TAIR
> 9.0) with Palmapper. However, I get the following error:
> *splice site position (366706) greater than chromosome length (154478)*
> Can
Mattia Chiesa wrote:
> Hi
>
> I'm Chiesa Mattia and I write from an hospital in Milan (ITALY).
> I
>
> want to install Galaxy locally on a CentOS platform. I read in your
> documentation that Python 2.5/2.6 is required but for some function also
> Python
>
> 2.4 (installed in our CentOS) is
Hi
I'm Chiesa Mattia and I write from an hospital in Milan (ITALY).
I
want to install Galaxy locally on a CentOS platform. I read in your
documentation that Python 2.5/2.6 is required but for some function also
Python
2.4 (installed in our CentOS) is okay.What are these
functions?
Thanks a
Hello all,
I am using Galaxy to align short reads of length 75 from A. Thaliana (TAIR
9.0) with Palmapper. However, I get the following error:
*splice site position (366706) greater than chromosome length (154478)*
Can anyone help me in this?
Best,
-Fayyaz
__
Galaxy Main public instance: data and job quotas
October 25, 2011
Dear Galaxy User,
Thank you very much for using our free and open public resource. Galaxy
has become extremely popular and as a result many people rely on it
daily for their analysis needs. Previously our service had no
restric
Sorry to hear it's not working for you - that link definitely did work
to an Australian Galaxy server behind a relatively tight and fussy
firewall.
Suggestions: check that it's not a local firewall problem - eg try
wget http://main.g2.bx.psu.edu/history/export_archive?id=735329393657ab63
or on the
Hi Ross,
that is exactly what I tried - "Export to file" and then enter the link
into "Import from File".
But the History never appears in the account on our Galaxy :(
It works between different accounts on main, but not from main to our's..
Am 25.10.2011 11:58, schrieb Ross:
Hi, Stefanie.
Hi, Stefanie.
I think you might want a URL pointing to an "archived history" if you
want to move your history to a different Galaxy?
I imported your test history into my account on main, then I used the
'export to file' option (it might not be optimally named since it
really creates an importable
Am 24.10.2011 21:05, schrieb Jeremy Goecks:
So - I'm logged in and the link is accessible.
(I tried with different accounts on the public server - that works; but not
importing to our own instance.)
The history must be "Accessible via link": Options --> Share/Publish --> Make
History Accessi
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