On 12/02/2013 11:14 PM, Philippe Moncuquet wrote:
Hi,
I hope this is relevant to the dev list but if it is not please let me know.
I was trying to estimate active users out of our registered users. I
ended counting users that had a job during the last month. How would you
guys do ?
I
Hi,
we want to put some more hard drives into your Galaxy Server. And we
plan to use the hierarchical ObjectStore for that purpose.
The new discs will be type=distributed id=primary and the old disc
will become type=disk id=secondary. If I understood correctly the
old disc is them in some
Dear Dr Johannes,Alot of thanks for you but i already sent the same issue to
galaxy-dev@lists.bx.psu.edu the galaxy mailing list without reply
i am so sorry for disturbance Best Regards,
https://www.mcpvirtualbusinesscard.com/VBCServer/elsayedhegazy/interactivecardEl-Sayed
HegazyIT Manager
On Tue, Dec 3, 2013 at 5:49 AM, Bjoern Gruening
bjoern.gruen...@gmail.comwrote:
The new discs will be type=distributed id=primary and the old disc
will become type=disk id=secondary. If I understood correctly the
old disc is them in some read-only state and will not touched until the
primary
Hello, Stephen
Although still under initial development, you may want to look into the
visualization registry for the infrastructure to render the region and
allow the user to interact with it:
http://wiki.galaxyproject.org/VisualizationsRegistry
Hi Björn,
atime is definitely not used by Galaxy, and we have generally disabled it
on all filesystems we mount.
--nate
On Tue, Dec 3, 2013 at 8:10 AM, Dannon Baker dannon.ba...@gmail.com wrote:
On Tue, Dec 3, 2013 at 5:49 AM, Bjoern Gruening bjoern.gruen...@gmail.com
wrote:
The new
Thanks for the info Nate and Dannon!
Bjoern
Hi Björn,
atime is definitely not used by Galaxy, and we have generally disabled
it on all filesystems we mount.
--nate
On Tue, Dec 3, 2013 at 8:10 AM, Dannon Baker dannon.ba...@gmail.com
wrote:
On Tue, Dec 3, 2013 at 5:49
I was planning to use server code to tile the large images and then use one of
a number of JavaScript libraries to render. Any browser should work without
extensions . Jim did this with visigene in the genome browser years ago.
- Robert
On Dec 3, 2013, at 9:16 AM, Carl Eberhard
VisiGene only sends gif and jpeg over the wire.
--
James Taylor, Associate Professor, Biology/CS, Emory University
On Tue, Dec 3, 2013 at 12:59 PM, Robert Baertsch baert...@soe.ucsc.edu wrote:
I was planning to use server code to tile the large images and then use one
of a number of
If you wanted to implement fancier tiling and display for tiff, the
extension point for this would be in the datatype's display_data method.
You can use this to do whatever you'd like, displaying an intermediate
page with relevant code for tiling, etc. See datatypes/tabular.py's
display_data
Hello,
I recently discovered the DeepTools program and have been looking forward
to using it with Galaxy Cloudman. Today I attempted to load DeepTools from
the Galaxy tool shed on my freshly started Galaxy Cloudman 2.0 instance and
got the following error:
Internal Server ErrorGalaxy was unable to
Hi Mohammed,
that seems to be a old Tool Shed bug that is already fixed. Which Galaxy
version are you running. Can you update to a more recent version?
Thanks for using Galaxy and deepTools,
Bjoern
Hello,
I recently discovered the DeepTools program and have been looking
forward to using it
Hi Bjorn,
Thanks for the quick response.
I am running version: 10201:ebe87051fadf, when I updated to the latest
version, I was able to start the install of DeepTools. The tool seemed to
be installing but when I went to refresh the page, I was greeted with this
message: Initializing repository
Hello all,
*I am pleased to formally announce the Galaxy Deployment Catalog
http://wiki.galaxyproject.org/Community/Deployments*, a place to describe
individual Galaxy deployments, and to learn how others in the community are
implementing Galaxy in production environments.
If you have a Galaxy
Am Dienstag, den 03.12.2013, 16:19 -0500 schrieb Mohammad Heydarian:
Hi Bjorn,
Thanks for the quick response.
I am running version: 10201:ebe87051fadf, when I updated to the latest
version, I was able to start the install of DeepTools. The tool
seemed to be installing but when I went to
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1
I'm at a bit of a loss here, I've found that when I have a GFF file, it
offers to be visualized, but I cannot figure out how to visualize on a
Fasta file in my history.
I've done the following
1. GFF3 output file - trackster
2. New viz
3. Build not
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