Hello Galaxy team,
I've recently begun building a resource usage monitor / predictor for
Galaxy as part of my Computer Science Honours degree and I was wanting to
at some later stage in my project, once the actual resource monitor is
built, to incorporate it to the actual Galaxy web interface.
Hi Ann,
We are in the process of doing the same thing here at the University
of Otago (New Zealand). If we are able to sort something via the
timezone difference (we are GMT+12, first to see the sun!) we would
very much be interested.
Cheers,
Ed
Hi everyone -
Here at the University of Iowa we
RE: The chat about NZ/AUS communication us here at Otago University
(Dunedin, NZ) are very very keen for this.
Please email us at edward.hi...@otago.ac.nz if this does decide to take off :)
Cheers,
Ed
___
Please keep all replies on the list
Hi Galaxy team,
This is going to be a very unhelpful message but I hope you have some
ideas to point me in the right direction!
For some reason our local Galaxy instance (set up with the production
server guide on the wiki minus all the fancy cluster stuff) is
refusing to run jobs except after a
Hi Guys,
So i'm looking at having the dataset history item that is currently running
to load in text from a txt file, re-reading the txt file every few seconds
or so.
I have found where it gets displayed in the
/templates/root/history_common.mako and have added
%include file=test.txt/
so that
that are going to be run.
This is because I wish to perform some pre-run analysis on all the tools in
the workflow before they get executed.
Thanks,
Edward Hills
Department of Biochemistry,
University of Otago,
Dunedin,
New Zealand.
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Please keep
Hi Galaxy-Team,
After reading a message on this mailing list about the job splitter I began
to investigate what and how this is used. Unfortunately I have been unable
to find any documentation on your website for it.
Am I blind and missing it or is it yet to be properly documented?
Sorry if
be done.
I see a class Text ( data ) which looks like every datatype is sent to.
Would it be best to implement a VCF class which is called when the datatype
is VCF?
Cheers,
Ed
On Wed, Oct 31, 2012 at 12:35 PM, Peter Cock p.j.a.c...@googlemail.comwrote:
On Tue, Oct 30, 2012 at 11:20 PM, Edward
is chosen?
Cheers,
Ed
On Wed, Oct 31, 2012 at 9:46 PM, Peter Cock p.j.a.c...@googlemail.comwrote:
On Wednesday, October 31, 2012, Edward Hills wrote:
Thanks Peter.
My next question is, I have found that VCF files don't get split properly
as the header is not included in the second file
Hi Galaxy team,
So our university has decided to switch our xgrid clusters back on and we
are looking to set Galaxy up on these. Has anyone got (or tried) to set up
Galaxy on xgrid before? xgrid supposedly conforms to DRMAA so technically
Galaxy should work, correct?
Cheers,
Ed
Hi Greg,
Try clicking the logout button. That should logout of the user you are
impersonating and back into you. Although, this does have a few quirks also
and may log you right out. Don't forget that when you are impersonating
someone the history may not be automatically loaded and you will have
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