Files are now uploaded in one zip file (Hannes_oocyte). Please et me know if you need additional information. Good luck! Hannes
On 1 Mrz., 16:14, Brian Pratt <[email protected]> wrote: > Oh, and send the xtandem inputs (mzxml and fasta), not the raw files. > > On Mon, Mar 1, 2010 at 7:14 AM, Brian Pratt <[email protected]>wrote: > > > > > Just put it in the pub directory, not a subdirectry. Consider using > > something like gzip to make the files smaller, too. > > > On Mon, Mar 1, 2010 at 2:40 AM, hcadrexler <[email protected]>wrote: > > >> Hi Brian, > > >> I just tried to upload a few .raw files and the fasta db into the pub > >> folder using filezilla, however, filezilla tells me that I that there > >> is no adequate directory for the upload (see error message)?? > > >> .............. > >> Command: STOR /pub/Hannes_20100301/20091125_AD_Boiani_oocyte_03.raw > >> Response: 550 /pub/Hannes_20100301/ipi.MOUSE.v3.64.fasta: No such > >> file > >> or directory > >> Command: PASV > >> Response: 550 /pub/Hannes_20100301/20091125_AD_Boiani_oocyte_03.raw: > >> No such file or directory > >> Error: Critical file transfer error > >> ............. > > >> Kind regards, > > >> Hannes > > >> On 26 Feb., 19:18, Brian Pratt <[email protected]> wrote: > >> > Strange indeed. If you can send me a minimum data set that shows the > >> > problem I could take a look (presumably three files and the fasta db). > >> If > >> > they're too big to email, you can ftp toftp:// > >> insilicos.serveftp.net/pub. > >> > Brian > >> > On Fri, Feb 26, 2010 at 7:10 AM, Hannes Drexler > >> > <[email protected]>wrote: > > >> > > Hi Brian, > > >> > > thought about it too, however, when I delete the first two > >> > > successfully handled files from the sequence and start the database > >> > > search again with the next / third file of the list, the subsequent > >> > > two files are also successfully sent through the pipeline. I repeated > >> > > it a few more times now and to me it looks like as if XTandem database > >> > > searches are currently only possible in tranches of two. Strange, > >> > > isn´it? > > >> > > Hannes > > >> > > 2010/2/24 Brian Pratt <[email protected]>: > >> > > > You'll want to narrow it down to identify the problem - for > >> example, > >> > > what > >> > > > happens when you omit that 3rd file? > > >> > > > On Wed, Feb 24, 2010 at 2:04 AM, hcadrexler < > >> [email protected]> > >> > > > wrote: > > >> > > >> Hi there, > > >> > > >> I tried to perform an XTandem search following the XTandem 2009 > >> > > >> tutorial using my own data (29 mzXML files). The Database search is > >> > > >> performed for the first two files in the sequence without any > >> problems > >> > > >> but then stops and does not proceed any further with the third (and > >> > > >> subsequent) files. I cannot figure out where the mistake was made. > >> > > >> Does anybody know why this might happen? > > >> > > >> Kind regards, > > >> > > >> Hannes > > >> > > >> -- > >> > > >> You received this message because you are subscribed to the Google > >> > > Groups > >> > > >> "spctools-discuss" group. > >> > > >> To post to this group, send email to > >> [email protected]. > >> > > >> To unsubscribe from this group, send email to > >> > > >> [email protected]<spctools-discuss%2Bunsubscrib > >> > > >> [email protected]> > >> <spctools-discuss%[email protected]<spctools-discuss%252Bunsub > >> [email protected]> > > >> > > . > >> > > >> For more options, visit this group at > >> > > >>http://groups.google.com/group/spctools-discuss?hl=en. > > >> > > > -- > >> > > > You received this message because you are subscribed to the Google > >> Groups > >> > > > "spctools-discuss" group. > >> > > > To post to this group, send email to > >> [email protected]. > >> > > > To unsubscribe from this group, send email to > >> > > > [email protected]<spctools-discuss%2Bunsubscrib > >> > > > [email protected]> > >> <spctools-discuss%[email protected]<spctools-discuss%252Bunsub > >> [email protected]> > > >> > > . > >> > > > For more options, visit this group at > >> > > >http://groups.google.com/group/spctools-discuss?hl=en. > > >> > > -- > >> > > You received this message because you are subscribed to the Google > >> Groups > >> > > "spctools-discuss" group. > >> > > To post to this group, send email to > >> [email protected]. > >> > > To unsubscribe from this group, send email to > >> > > [email protected]<spctools-discuss%2Bunsubscrib > >> > > [email protected]> > >> <spctools-discuss%[email protected]<spctools-discuss%252Bunsub > >> [email protected]> > > >> > > . > >> > > For more options, visit this group at > >> > >http://groups.google.com/group/spctools-discuss?hl=en. > > >> -- > >> You received this message because you are subscribed to the Google Groups > >> "spctools-discuss" group. > >> To post to this group, send email to [email protected]. > >> To unsubscribe from this group, send email to > >> [email protected]<spctools-discuss%2Bunsubscrib > >> [email protected]> > >> . > >> For more options, visit this group at > >>http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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